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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 65/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
EBarrays1.9.2Deepayan SarkarLast Changed Date: 2007-05-23 10:51:11 -0700 Last Changed Rev: 24935 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | [ OK ] | OK |
Package: EBarrays |
Version: 1.9.2 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check EBarrays_1.9.2.tar.gz |
RetCode: 0 |
Time: 180.5 seconds |
Status: OK |
CheckDir: EBarrays.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/Users/biocbuild/bbs-2.1-bioc/meat/EBarrays.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-08-10 r42465) * checking for file 'EBarrays/DESCRIPTION' ... OK * this is package 'EBarrays' version '1.9.2' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'EBarrays' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $BLAS_LIBS ... OK * creating EBarrays-Ex.R ... OK * checking examples ... OK * checking tests ... Running 'test.R' OK * checking package vignettes in 'inst/doc' ... OK * creating EBarrays-manual.tex ... OK * checking EBarrays-manual.tex ... OK
EBarrays.Rcheck/00install.out:
* Installing *source* package 'EBarrays' ... ** libs ** arch - i386 gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -fPIC -g -O2 -Wall -std=gnu99 -march=nocona -c ebarrays.c -o ebarrays.o gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o EBarrays.so ebarrays.o -F/Library/Frameworks/R.framework/.. -framework R ** arch - ppc gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -Wall -c ebarrays.c -o ebarrays.o gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o EBarrays.so ebarrays.o -F/Library/Frameworks/R.framework/.. -framework R ** R ** data ** demo ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: lattice ** help >>> Building/Updating help pages for package 'EBarrays' Formats: text html latex example ebarraysFamily-class text html latex example ebplots text html latex example emfit text html latex example gould text html latex example postprob text html latex utilities text html latex example ** building package indices ... * DONE (EBarrays)