MAIT

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see MAIT.

Statistical Analysis of Metabolomic Data

Bioconductor version: 3.7

The MAIT package contains functions to perform end-to-end statistical analysis of LC/MS Metabolomic Data. Special emphasis is put on peak annotation and in modular function design of the functions.

Author: Francesc Fernandez-Albert, Rafael Llorach, Cristina Andres-LaCueva, Alexandre Perera

Maintainer: Pol Sola-Santos <pol.soladelossantos at gmail.com>

Citation (from within R, enter citation("MAIT")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MAIT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MAIT")

\maketitleMAIT Vignette	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	MassSpectrometry, Metabolomics, Software
Version	1.14.0
In Bioconductor since	BioC 3.0 (R-3.1) (9.5 years)
License	GPL-2
Depends	R (>= 2.10), CAMERA, Rcpp, pls
Imports	gplots, e1071, class, MASS, plsgenomics, agricolae, xcms, methods, caret
System Requirements
URL

Suggests	faahKO
Linking To
Enhances	rgl
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MAIT_1.14.0.tar.gz
Windows Binary	MAIT_1.14.0.zip
Mac OS X 10.11 (El Capitan)	MAIT_1.14.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MAIT
Source Repository (Developer Access)	git clone [email protected]:packages/MAIT
Package Short Url	https://bioconductor.org/packages/MAIT/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.7	Source Archive