CONFESS

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see CONFESS.

Cell OrderiNg by FluorEScence Signal

Bioconductor version: 3.7

Single Cell Fluidigm Spot Detector.

Author: Diana LOW and Efthimios MOTAKIS

Maintainer: Diana LOW <dlow at imcb.a-star.edu.sg>

Citation (from within R, enter citation("CONFESS")):

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CONFESS")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CONFESS")

biocViews	CellBiology, Classification, Clustering, DataImport, GeneExpression, QualityControl, RNASeq, Regression, Software, TimeCourse, Visualization
Version	1.8.0
In Bioconductor since	BioC 3.3 (R-3.3) (8 years)
License	GPL-2
Depends	R (>= 3.3), grDevices, utils, stats, graphics
Imports	methods, changepoint, cluster, contrast, data.table (>= 1.9.7), ecp, EBImage, flexmix, flowCore, flowClust, flowMeans, flowMerge, flowPeaks, foreach, ggplot2, grid, limma, MASS, moments, outliers, parallel, plotrix, raster, readbitmap, reshape2, SamSPECTRAL, waveslim, wavethresh, zoo
System Requirements
URL

Suggests	BiocStyle, knitr, rmarkdown, CONFESSdata
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	CONFESS_1.8.0.tar.gz
Windows Binary	CONFESS_1.8.0.zip
Mac OS X 10.11 (El Capitan)	CONFESS_1.8.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/CONFESS
Source Repository (Developer Access)	git clone [email protected]:packages/CONFESS
Package Short Url	https://bioconductor.org/packages/CONFESS/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.7	Source Archive