| Package | Maintainer | Title |
|---|---|---|
| BSgenome.Hsapiens.UCSC.hg17 | Biocore Team c/o BioC user list | Homo sapiens (Human) full genome (UCSC version hg17) |
| BSgenome.Hsapiens.UCSC.hg18 | Biocore Team c/o BioC user list | Homo sapiens (Human) full genome (UCSC version hg18) |
| BSgenome.Hsapiens.UCSC.hg19 | Biocore Team c/o BioC user list | Homo sapiens (Human) full genome (UCSC version hg19) |
| cyp450cdf | Biocore Data Team | cyp450cdf |
| gahgu133aprobe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu133a |
| gahgu133bprobe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu133b |
| gahgu133plus2probe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu133plus2 |
| gahgu95av2probe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu95av2 |
| gahgu95bprobe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu95b |
| gahgu95cprobe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu95c |
| gahgu95dprobe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu95d |
| gahgu95eprobe | Francesco Ferrari | Probe sequence data for microarrays of type gahgu95e |
| GGHumanMethCancerPanelv1.db | Sean Davis | Illumina Golden Gate Human Methylation Cancer Panel Version 1 annotation data (chip GGHumanMethCancerPanelv1) |
| gp53cdf | Biocore Data Team | gp53cdf |
| h10kcod.db | Diego Diez | GE CodeLink UniSet Human I Bioarray (~10 000 human genes) annotation data (chip h10kcod) |
| h20kcod.db | Diego Diez | GE CodeLink UniSet Human 20k I Bioarray annotation data (chip h20kcod) |
| hcg110.db | Biocore Data Team | Affymetrix Human Cancer G110 Array annotation data (chip hcg110) |
| hcg110cdf | Biocore Data Team | hcg110cdf |
| hcg110probe | Biocore Data Team | Probe sequence data for microarrays of type hcg110 |
| hgfocus.db | Biocore Data Team | Affymetrix Human Genome Focus Array annotation data (chip hgfocus) |
| hgfocuscdf | Biocore Data Team | hgfocuscdf |
| hgfocusprobe | Biocore Data Team | Probe sequence data for microarrays of type hgfocus |
| hgu133a.db | Biocore Data Team | Affymetrix Human Genome U133 Set annotation data (chip hgu133a) |
| hgu133a2.db | Biocore Data Team | Affymetrix Human Genome U133A 2.0 Array annotation data (chip hgu133a2) |
| hgu133a2cdf | Biocore Data Team | hgu133a2cdf |
| hgu133a2probe | Biocore Data Team | Probe sequence data for microarrays of type hgu133a2 |
| hgu133acdf | Biocore Data Team | hgu133acdf |
| hgu133aprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu133a |
| hgu133atagcdf | Biocore Data Team | hgu133atagcdf |
| hgu133atagprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu133atag |
| hgu133b.db | Biocore Data Team | Affymetrix Human Genome U133 Set annotation data (chip hgu133b) |
| hgu133bcdf | Biocore Data Team | hgu133bcdf |
| hgu133bprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu133b |
| hgu133plus2.db | Biocore Data Team | Affymetrix Human Genome U133 Plus 2.0 Array annotation data (chip hgu133plus2) |
| hgu133plus2cdf | Biocore Data Team | hgu133plus2cdf |
| hgu133plus2probe | Biocore Data Team | Probe sequence data for microarrays of type hgu133plus2 |
| hgu95a.db | Biocore Data Team | Affymetrix Human Genome U95 Set annotation data (chip hgu95a) |
| hgu95acdf | Biocore Data Team | hgu95acdf |
| hgu95aprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu95a |
| hgu95av2 | Biocore Data Team | Affymetrix Human Genome U95 Set Annotation Data (hgu95av2) |
| hgu95av2.db | Biocore Data Team | Affymetrix Human Genome U95 Set annotation data (chip hgu95av2) |
| hgu95av2cdf | Biocore Data Team | hgu95av2cdf |
| hgu95av2probe | Biocore Data Team | Probe sequence data for microarrays of type hgu95av2 |
| hgu95b.db | Biocore Data Team | Affymetrix Human Genome U95 Set annotation data (chip hgu95b) |
| hgu95bcdf | Biocore Data Team | hgu95bcdf |
| hgu95bprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu95b |
| hgu95c.db | Biocore Data Team | Affymetrix Human Genome U95 Set annotation data (chip hgu95c) |
| hgu95ccdf | Biocore Data Team | hgu95ccdf |
| hgu95cprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu95c |
| hgu95d.db | Biocore Data Team | Affymetrix Human Genome U95 Set annotation data (chip hgu95d) |
| hgu95dcdf | Biocore Data Team | hgu95dcdf |
| hgu95dprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu95d |
| hgu95e.db | Biocore Data Team | Affymetrix Human Genome U95 Set annotation data (chip hgu95e) |
| hgu95ecdf | Biocore Data Team | hgu95ecdf |
| hgu95eprobe | Biocore Data Team | Probe sequence data for microarrays of type hgu95e |
| hguatlas13k.db | Biocore Data Team | Clontech BD Atlas Long Oligos Human 13K annotation data (chip hguatlas13k) |
| hgubeta7.db | Biocore Data Team | Unknown annotation data (chip hgubeta7) |
| hguDKFZ31.db | Biocore Data Team | Unknown annotation data (chip hguDKFZ31) |
| hgug4100a.db | Biocore Data Team | Agilent Human 1 cDNA Microarray Kit annotation data (chip hgug4100a) |
| hgug4101a.db | Biocore Data Team | Agilent Human 2 cDNA Microarry Kit annotation data (chip hgug4101a) |
| hgug4110b.db | Biocore Data Team | Agilent Human 1A (V2) annotation data (chip hgug4110b) |
| hgug4111a.db | Biocore Data Team | Agilent Human 1B annotation data (chip hgug4111a) |
| hgug4112a.db | Biocore Data Team | Agilent "Human Genome, Whole" annotation data (chip hgug4112a) |
| hguqiagenv3.db | Biocore Data Team | Qiagen Qiagen V3.0 oligo set annotation data (chip hguqiagenv3) |
| hi16cod.db | Diego Diez | GE CodeLink Human Inflammation 16 Bioarray annotation data (chip hi16cod) |
| hivprtplus2cdf | Biocore Data Team | hivprtplus2cdf |
| hom.Hs.inp.db | Biocore Data Team | Homology information for Homo Sapiens from Inparanoid |
| hs25kresogen.db | Simon de Bernard | RNG_MRC Human Pangenomic 25k Set annotation data (chip hs25kresogen) |
| Hs6UG171.db | Biocore Data Team | A package containing metadata for Hs6UG171 arrays |
| hthgu133a.db | Biocore Data Team | Affymetrix HT Human Genome U133 Array Plate Set annotation data (chip hthgu133a) |
| hthgu133acdf | Biocore Data Team | hthgu133acdf |
| hthgu133aprobe | Biocore Data Team | Probe sequence data for microarrays of type hthgu133a |
| hthgu133b.db | Biocore Data Team | Affymetrix HT Human Genome U133 Array Plate Set annotation data (chip hthgu133b) |
| hthgu133bcdf | Biocore Data Team | hthgu133bcdf |
| hthgu133bprobe | Biocore Data Team | Probe sequence data for microarrays of type hthgu133b |
| hthgu133pluspmcdf | Biocore Data Team | hthgu133pluspmcdf |
| hthgu133pluspmprobe | Biocore Data Team | Probe sequence data for microarrays of type hthgu133pluspm |
| hu35ksuba.db | Biocore Data Team | Affymetrix Human Genome HU35K Set annotation data (chip hu35ksuba) |
| hu35ksubacdf | Biocore Data Team | hu35ksubacdf |
| hu35ksubaprobe | Biocore Data Team | Probe sequence data for microarrays of type hu35ksuba |
| hu35ksubb.db | Biocore Data Team | Affymetrix Human Genome HU35K Set annotation data (chip hu35ksubb) |
| hu35ksubbcdf | Biocore Data Team | hu35ksubbcdf |
| hu35ksubbprobe | Biocore Data Team | Probe sequence data for microarrays of type hu35ksubb |
| hu35ksubc.db | Biocore Data Team | Affymetrix Human Genome HU35K Set annotation data (chip hu35ksubc) |
| hu35ksubccdf | Biocore Data Team | hu35ksubccdf |
| hu35ksubcprobe | Biocore Data Team | Probe sequence data for microarrays of type hu35ksubc |
| hu35ksubd.db | Biocore Data Team | Affymetrix Human Genome HU35K Set annotation data (chip hu35ksubd) |
| hu35ksubdcdf | Biocore Data Team | hu35ksubdcdf |
| hu35ksubdprobe | Biocore Data Team | Probe sequence data for microarrays of type hu35ksubd |
| hu6800.db | Biocore Data Team | Affymetrix HuGeneFL Genome Array annotation data (chip hu6800) |
| hu6800cdf | Biocore Data Team | hu6800cdf |
| hu6800probe | Biocore Data Team | Probe sequence data for microarrays of type hu6800 |
| hu6800subacdf | Biocore Data Team | hu6800subacdf |
| hu6800subbcdf | Biocore Data Team | hu6800subbcdf |
| hu6800subccdf | Biocore Data Team | hu6800subccdf |
| hu6800subdcdf | Biocore Data Team | hu6800subdcdf |
| HuExExonProbesetLocationHg18 | Raffaele A. Calogero | Exon-level probeset chromosome location for microarrays of type HuEx |
| HuExExonProbesetLocationHg19 | Raffaele A. Calogero | Exon-level probeset chromosome location for microarrays of type HuEx |
| hugene10stprobeset.db | Li, Arthur | Affymetrix Human Gene 1.0-ST Probeset Array Revision 5 annotation data (chip hugene10stprobeset) |
| hugene10sttranscriptcluster.db | Li, Arthur | Affymetrix Human Gene 1.0-ST Array Transcriptcluster Revision 5 annotation data (chip hugene10sttranscriptcluster) |
| hugene10stv1cdf | Biocore Data Team | hugene10stv1cdf |
| hugene10stv1probe | Biocore Data Team | Probe sequence data for microarrays of type hugene10stv1 |
| hugene11stprobeset.db | Li, Arthur | Affymetrix Human Gene 1.1-ST Probeset Array annotation data (chip hugene11stprobeset) |
| hugene11sttranscriptcluster.db | Li, Arthur | Affymetrix Human Gene 1.1-ST Array Transcriptcluster annotation data (chip hugene11sttranscriptcluster) |
| human.db0 | Biocore Data Team | Base Level Annotation databases for human |
| humanCHRLOC | Biocore Data Team | A data package containing annotation data for humanCHRLOC |
| HuO22.db | Biocore Data Team | FHCRC Genomics Shared Resource HuO22 Annotation Data (HuO22) |
| hwgcod.db | Diego Diez | GE CodeLink Human Whole Genome Bioarray (~55 000 human genes) annotation data (chip hwgcod) |
| illuminaHumanDASLBeadID.db | Mark Dunning | Illumina HumanDASL annotation data (chip illuminaHumanDASLBeadID) |
| IlluminaHumanMethylation27k.db | Sean Davis | Illumina Illumina Human Methylation 27k annotation data (chip IlluminaHumanMethylation27k) |
| illuminaHumanv1.db | Mark Dunning | Illumina HumanWGv1 annotation data (chip illuminaHumanv1) |
| illuminaHumanv1BeadID.db | Mark Dunning | Illumina HumanWGv1 annotation data (chip illuminaHumanv1BeadID) |
| illuminaHumanv2.db | Mark Dunning | Illumina HumanWGv2 annotation data (chip illuminaHumanv2) |
| illuminaHumanv2BeadID.db | Mark Dunning | Illumina HumanWGv2 annotation data (chip illuminaHumanv2BeadID) |
| illuminaHumanv3.db | Mark Dunning | Illumina HumanWGv3 annotation data (chip illuminaHumanv3) |
| illuminaHumanv3BeadID.db | Mark Dunning | Illumina HumanWGv3 annotation data (chip illuminaHumanv3BeadID) |
| JazaeriMetaData.db | Biocore Data Team | A data package containing annotation data for JazaeriMetaData |
| LAPOINTE.db | Biocore Data Team | A package containing metadata for LAPOINTE arrays |
| lumiHumanAll.db | Gang Feng and Pan Du | Illumina Human Expression BeadChips (include all versions: version 1 to 3) annotation data (chip lumiHumanAll) |
| mirna10probe | Biocore Data Team | Probe sequence data for microarrays of type mirna10 |
| Norway981.db | Biocore Data Team | Norway981 http://genome-www5.stanford.edu/ Annotation Data (Norway981) |
| nugohs1a520180.db | Philip de Groot | Affymetrix nugohs1a520180 annotation data (chip nugohs1a520180) |
| nugohs1a520180cdf | Philip de Groot | nugohs1a520180cdf |
| nugohs1a520180probe | Philip de Groot | Probe sequence data for microarrays of type nugohs1a520180 |
| OperonHumanV3.db | Biocore Data Team | FHCRC Nelson Lab OperonHumanV3 Annotation Data (OperonHumanV3) |
| org.Hs.eg.db | Biocore Data Team | Genome wide annotation for Human |
| PartheenMetaData.db | Biocore Data Team | PartheenMetaData http://swegene.onk.lu.se Annotation Data (PartheenMetaData) |
| pedbarrayv10.db | Biocore Data Team | FHCRC Nelson Lab pedbarrayv10 Annotation Data (pedbarrayv10) |
| pedbarrayv9.db | Biocore Data Team | FHCRC Nelson Lab pedbarrayv9 Annotation Data (pedbarrayv9) |
| POCRCannotation.db | Biocore Data Team | A package containing metadata for POCRC arrays |
| RmiR.Hs.miRNA | Francesco Favero | Various databases of microRNA Targets |
| RmiR.hsa | Francesco Favero | Various databases of microRNA Targets |
| Roberts2005Annotation.db | Biocore Data Team | Roberts2005Annotation Annotation Data (Roberts2005Annotation) |
| SHDZ.db | Biocore Data Team | SHDZ http://genome-www5.stanford.edu/ Annotation Data (SHDZ) |
| SNPlocs.Hsapiens.dbSNP.20071016 | H. Pages | SNP locations for Homo sapiens |
| SNPlocs.Hsapiens.dbSNP.20080617 | H. Pages | SNP locations for Homo sapiens |
| SNPlocs.Hsapiens.dbSNP.20090506 | H. Pages | SNP locations for Homo sapiens (dbSNP BUILD 130) |
| SNPlocs.Hsapiens.dbSNP.20100427 | H. Pages | SNP locations for Homo sapiens (dbSNP BUILD 131) |
| test1cdf | Biocore Data Team | test1cdf |
| test2cdf | Biocore Data Team | test2cdf |
| test3cdf | Biocore Data Team | test3cdf |
| test3probe | Biocore Data Team | Probe sequence data for microarrays of type test3 |
| u133aaofav2cdf | Biocore Data Team | u133aaofav2cdf |
| u133x3p.db | Biocore Data Team | Affymetrix Human X3P Array annotation data (chip u133x3p) |
| u133x3pcdf | Biocore Data Team | u133x3pcdf |
| u133x3pprobe | Biocore Data Team | Probe sequence data for microarrays of type u133x3p |