RNAither

Statistical analysis of high-throughput RNAi screens

RNAither analyzes cell-based RNAi screens, and includes quality assessment, customizable normalization and statistical tests, leading to lists of significant genes and biological processes.

Author	Nora Rieber and Lars Kaderali, University of Heidelberg, Viroquant Research Group Modeling, Im Neuenheimer Feld 267, 69120 Heidelberg, Germany
Maintainer	Nora Rieber

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RNAither")

Documentation

RNAither	PDF	R Script
Reference Manual

Details

biocViews	CellBasedAssays , QualityControl , Preprocessing , Visualization , Bioinformatics , Annotation , GO
Depends	R , topGO , RankProd , prada
Imports	geneplotter , limma , biomaRt
Suggests
System Requirements
License	Artistic License 2.0
URL
Depends On Me
Imports Me
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Development History	Bioconductor Changelog

Package Downloads

Package source	RNAither_1.4.2.tar.gz
Windows binary	RNAither_1.4.2.zip
MacOS X 10.4 (Tiger) binary	RNAither_1.4.2.tgz
MacOS X 10.5 (Leopard) binary	RNAither_1.4.2.tgz
Package Downloads Report	Downloads Stats