GenomeGraphs
Plotting genomic information from Ensembl
Genomic data analyses requires integrated visualization of
known genomic information and new experimental data.
GenomeGraphs uses the biomaRt package to perform live
annotation queries to Ensembl and translates this to e.g.
gene/transcript structures in viewports of the grid graphics
package. This results in genomic information plotted together
with your data. Another strength of GenomeGraphs is to plot
different data types such as array CGH, gene expression,
sequencing and other data, together in one plot using the same
genome coordinate system.
| Author |
Steffen Durinck , James Bullard
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| Maintainer |
Steffen Durinck |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("GenomeGraphs")
Documentation
Details
| biocViews |
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| License |
Artistic-2.0 |
| URL |
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| Development History |
Bioconductor Changelog
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Package Downloads