xcms

LC/MS and GC/MS Data Analysis

Framework for processing and visualization of chromatographically separated mass spectral data. Imports from AIA/ANDI NetCDF, mzXML, and mzData files. Preprocesses data for high-throughput, untargeted analyte profiling.

Author Colin A. Smith , Ralf Tautenhahn
Maintainer Colin A. Smith

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("xcms")

Vignettes (Documentation)

Package Downloads
FlowChart.pdf
xcmsInstall.pdf
xcmsPreprocess.pdf
Source xcms_1.12.1.tar.gz
Windows binary xcms_1.12.1.zip
OS X binary xcms_1.12.1.tgz

Details

biocViews
Technology , MassSpectrometry
Depends R, methods
Suggests faahKO, multtest, rgl, MassSpecWavelet
Imports
SystemRequirements NetCDF, zlib
License GPL version 2 or newer
URL http://metlin.scripps.edu/download/
dependsOnMe
suggestsMe MassSpecWavelet