oligo

Oligonucleotide Arrays

A package to analyze oligonucleotide arrays (expression/SNP/tiling/exon) at probe-level.

Author Benilton Carvalho , Rafael A. Irizarry and Ben Bolstad with contributions from Vince Carey, Robert Gentleman, Wolfgang Huber
Maintainer Benilton Carvalho

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("oligo")

Vignettes (Documentation)

Package Downloads

ClassesUsedInOligo.pdf
oligo.pdf
Source oligo_1.4.0.tar.gz
Windows binary oligo_1.4.0.zip
OS X binary oligo_1.4.0.tgz

Details

biocViews
Depends methods, R, Biobase, splines, RSQLite, preprocessCore, AnnotationDbi, affxparser, oligoClasses
Suggests hapmap100kxba, pd.mapping50k.xba240
Imports
SystemRequirements
License LGPL version 2 or newer
URL
dependsOnMe makePlatformDesign, pdInfoBuilder
suggestsMe oligoClasses