GeneSelector

The term 'GeneSelector' refers to a filter selecting those genes which are consistently identified as differentially expressed using various statistical procedures. 'Selected' genes are those present at the top of the list in various featured ranking methods (currently 15). In addition, the stability of the findings can be taken in account in the final ranking by examining perturbed versions of the original data set, e.g. by leaving samples, swapping class labels, generating bootstrap replicates or adding noise.

Author	Martin Slawski , Anne-Laure Boulesteix .
Maintainer	Martin Slawski

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GeneSelector")

Vignettes (Documentation)

Package Downloads

GeneSelector.pdf

Source	GeneSelector_1.0.1.tar.gz
Windows binary	GeneSelector_1.0.1.zip
OS X binary	GeneSelector_1.0.1.tgz

Details

biocViews	Statistics , DifferentialExpression
Depends	R, methods, stats, Biobase
Suggests	multtest, siggenes, samr, limma, sma
Imports
SystemRequirements
License	GPL (version 2 or later)
URL
dependsOnMe
suggestsMe