GOstats

Tools for manipulating GO and microarrays.

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

Author R. Gentleman and S. Falcon
Maintainer Robert Gentleman

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GOstats")

Vignettes (Documentation)

Package Downloads

GOstatsHyperG.pdf
GOvis.pdf
Source GOstats_2.6.0.tar.gz
Windows binary GOstats_2.6.0.zip
OS X binary GOstats_2.6.0.tgz

Details

biocViews
Depends graph, GO.db, annotate, RBGL, Biobase, Category, methods
Suggests hgu95av2.db, ALL, multtest, genefilter, RColorBrewer, Rgraphviz, xtable, SparseM
Imports Biobase, Category, methods, AnnotationDbi
SystemRequirements
License Artistic-2.0
URL
dependsOnMe ScISI, affycoretools, ppiStats
suggestsMe BiocCaseStudies, GSEAlm, globaltest, oneChannelGUI, safe