############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data tidybulk ### ############################################################################## ############################################################################## * checking for file ‘tidybulk/DESCRIPTION’ ... OK * preparing ‘tidybulk’: * checking DESCRIPTION meta-information ... OK * installing the package to process help pages * creating vignettes ... ERROR --- re-building ‘introduction.Rmd’ using knitr Quitting from lines 483-487 [adjust] (introduction.Rmd) Error: processing vignette 'introduction.Rmd' failed with diagnostics: tidybulk says: The following packages are required: - sva Please install them by running: if (!requireNamespace('BiocManager', quietly = TRUE)) install.packages('BiocManager', repos = 'https://cloud.r-project.org') BiocManager::install(c('sva'), ask = FALSE) --- failed re-building ‘introduction.Rmd’ SUMMARY: processing the following file failed: ‘introduction.Rmd’ Error: Vignette re-building failed. Execution halted