############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r lpsymphony -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data lpsymphony ### ############################################################################## ############################################################################## * checking for file 'lpsymphony/DESCRIPTION' ... OK * preparing 'lpsymphony': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... OK * cleaning src * checking for LF line-endings in source and make files and shell scripts * checking for empty or unneeded directories * building 'lpsymphony_1.35.0.tar.gz' Warning: file 'lpsymphony/cleanup' did not have execute permissions: corrected Warning: file 'lpsymphony/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/Cgl/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/Clp/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/CoinUtils/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/Osi/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/SYMPHONY/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/ThirdParty/Blas/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/ThirdParty/Glpk/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/ThirdParty/Lapack/configure' did not have execute permissions: corrected Warning: file 'lpsymphony/src/SYMPHONY/configure' did not have execute permissions: corrected