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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data deepSNV
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* checking for file ‘deepSNV/DESCRIPTION’ ... OK
* preparing ‘deepSNV’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘deepSNV’ ...
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14)’
using C++ compiler: ‘g++ (GCC) 10.3.1’
g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rhtslib/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -Werror=format-security -DR_NO_REMAP -c bam2R.cpp -o bam2R.o
bam2R.cpp:12: warning: "R_NO_REMAP" redefined
   12 | #define R_NO_REMAP
      | 
<command-line>: note: this is the location of the previous definition
gcc -I"/home/biocbuild/R/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rhtslib/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -Werror=format-security -c betabinom.c -o betabinom.o
betabinom.c: In function ‘pbb’:
betabinom.c:27:16: warning: unused variable ‘log’ [-Wunused-variable]
   27 |         int i, log=0;
      |                ^~~
g++ -std=gnu++17 -shared -L/home/biocbuild/R/R/lib -L/usr/local/lib -o deepSNV.so bam2R.o betabinom.o /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rhtslib/usrlib/libhts.a -lcurl -lbz2 -llzma -lz -L/home/biocbuild/R/R/lib -lR
installing to /home/biocbuild/tmp/RtmpbnmYo6/Rinstfc7dea83d85/00LOCK-deepSNV/00new/deepSNV/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘VariantAnnotation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/RSQLite/libs/RSQLite.so':
  /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.32' not found (required by /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/RSQLite/libs/RSQLite.so)
Execution halted
ERROR: lazy loading failed for package ‘deepSNV’
* removing ‘/home/biocbuild/tmp/RtmpbnmYo6/Rinstfc7dea83d85/deepSNV’
      -----------------------------------
ERROR: package installation failed