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### Running command:
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###   chmod a+r VariantExperiment -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data VariantExperiment
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* checking for file 'VariantExperiment/DESCRIPTION' ... OK
* preparing 'VariantExperiment':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'VariantExperiment-class.Rmd' using rmarkdown

Quitting from lines 245-248 [makeVariantExperimentFromVCF] (VariantExperiment-class.Rmd)
Error: processing vignette 'VariantExperiment-class.Rmd' failed with diagnostics:
The GDS node "$ref" does not exist.
--- failed re-building 'VariantExperiment-class.Rmd'

SUMMARY: processing the following file failed:
  'VariantExperiment-class.Rmd'

Error: Vignette re-building failed.
Execution halted