############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data PAA ### ############################################################################## ############################################################################## * checking for file ‘PAA/DESCRIPTION’ ... OK * preparing ‘PAA’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes ----------------------------------- * installing *source* package ‘PAA’ ... ** using staged installation ** libs using C compiler: ‘gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14)’ using C++ compiler: ‘g++ (GCC) 10.3.1’ gcc -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c PAA_init.c -o PAA_init.o g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -DR_NO_REMAP -c joinMCountResults.cpp -o joinMCountResults.o g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -DR_NO_REMAP -c mCount.cpp -o mCount.o g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -DR_NO_REMAP -c mMsMatrix.cpp -o mMsMatrix.o g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -DR_NO_REMAP -c sampling.cpp -o sampling.o Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/libs/Rcpp.so': /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.32' not found (required by /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/libs/Rcpp.so) Calls: loadNamespace -> library.dynam -> dyn.load Execution halted g++ -std=gnu++17 -shared -L/home/biocbuild/R/R/lib -L/usr/local/lib -o PAA.so PAA_init.o RcppExports.o joinMCountResults.o mCount.o mMsMatrix.o sampling.o -L/home/biocbuild/R/R/lib -lR Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/libs/Rcpp.so': /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.32' not found (required by /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/libs/Rcpp.so) Calls: loadNamespace -> library.dynam -> dyn.load Execution halted installing to /home/biocbuild/tmp/Rtmpncj866/Rinst12194b240ed874/00LOCK-PAA/00new/PAA/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/libs/Rcpp.so': /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.32' not found (required by /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/Rcpp/libs/Rcpp.so) Execution halted ERROR: lazy loading failed for package ‘PAA’ * removing ‘/home/biocbuild/tmp/Rtmpncj866/Rinst12194b240ed874/PAA’ ----------------------------------- ERROR: package installation failed