############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL MEDME ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library’ * installing *source* package ‘MEDME’ ... ** using staged installation ** libs using C compiler: ‘gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14)’ gcc -I"/home/biocbuild/R/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c MEDMEweight.c -o MEDMEweight.o MEDMEweight.c: In function ‘MEDMEweight’: MEDMEweight.c:77:18: warning: ‘weight’ may be used uninitialized [-Wmaybe-uninitialized] 77 | MeDIPsum = MeDIPsum + MeDIP[j] * weight; | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ MEDMEweight.c:30:10: note: ‘weight’ was declared here 30 | double weight, relPos; | ^~~~~~ MEDMEweight.c:91:9: warning: ‘Max’ may be used uninitialized [-Wmaybe-uninitialized] 91 | if(AMSfinal[i] > Max) {AMSfinal[i] = Max;} | ^ MEDMEweight.c:36:24: note: ‘Max’ was declared here 36 | double B,C,D,E, Min, Max, Mlim; | ^~~ MEDMEweight.c:92:42: warning: ‘Min’ may be used uninitialized [-Wmaybe-uninitialized] 92 | if(AMSfinal[i] < Min) {AMSfinal[i] = Min;} | ~~~~~~~~~~~~^~~~~ MEDMEweight.c:36:19: note: ‘Min’ was declared here 36 | double B,C,D,E, Min, Max, Mlim; | ^~~ MEDMEweight.c:90:33: warning: ‘E’ may be used uninitialized [-Wmaybe-uninitialized] 90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); | ^~~~~~~~ MEDMEweight.c:36:16: note: ‘E’ was declared here 36 | double B,C,D,E, Min, Max, Mlim; | ^ MEDMEweight.c:90:47: warning: ‘D’ may be used uninitialized [-Wmaybe-uninitialized] 90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); | ~~~^~~~~~~ MEDMEweight.c:36:14: note: ‘D’ was declared here 36 | double B,C,D,E, Min, Max, Mlim; | ^ MEDMEweight.c:90:63: warning: ‘C’ may be used uninitialized [-Wmaybe-uninitialized] 90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); | ~~~~~~^~~~ MEDMEweight.c:36:12: note: ‘C’ was declared here 36 | double B,C,D,E, Min, Max, Mlim; | ^ MEDMEweight.c:90:33: warning: ‘B’ may be used uninitialized [-Wmaybe-uninitialized] 90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); | ^~~~~~~~ MEDMEweight.c:36:10: note: ‘B’ was declared here 36 | double B,C,D,E, Min, Max, Mlim; | ^ gcc -shared -L/home/biocbuild/R/R/lib -L/usr/local/lib -o MEDME.so MEDMEweight.o -L/home/biocbuild/R/R/lib -lR installing to /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/00LOCK-MEDME/00new/MEDME/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MEDME)