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INSTALL report for mbkmeans on malbec2

This page was generated on 2019-10-16 12:17:54 -0400 (Wed, 16 Oct 2019).

Package 932/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mbkmeans 1.0.0
Davide Risso
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/mbkmeans
Branch: RELEASE_3_9
Last Commit: 42e4066
Last Changed Date: 2019-05-02 11:54:15 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mbkmeans
Version: 1.0.0
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL mbkmeans
StartedAt: 2019-10-15 18:52:26 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:53:19 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 53.2 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL mbkmeans
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘mbkmeans’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rhdf5lib/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/beachmat/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/ClusterR/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rhdf5lib/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/beachmat/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/ClusterR/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c mini_batch.cpp -o mini_batch.o
In file included from mini_batch.cpp:3:0:
/home/biocbuild/bbs-3.9-bioc/R/library/ClusterR/include/ClusterRHeader.h: In member function ‘arma::mat clustR::ClustHeader::KMEANS_arma(arma::mat&, int, int, bool, std::__cxx11::string, Rcpp::Nullable >, int)’:
/home/biocbuild/bbs-3.9-bioc/R/library/ClusterR/include/ClusterRHeader.h:837:14: warning: variable ‘status’ set but not used [-Wunused-but-set-variable]
         bool status;
              ^~~~~~
/home/biocbuild/bbs-3.9-bioc/R/library/ClusterR/include/ClusterRHeader.h: In member function ‘Rcpp::List clustR::ClustHeader::GMM_arma(arma::mat&, int, std::__cxx11::string, std::__cxx11::string, int, int, bool, double, int)’:
/home/biocbuild/bbs-3.9-bioc/R/library/ClusterR/include/ClusterRHeader.h:1433:14: warning: variable ‘status’ set but not used [-Wunused-but-set-variable]
         bool status;
              ^~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o mbkmeans.so RcppExports.o mini_batch.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-mbkmeans/00new/mbkmeans/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mbkmeans)