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BUILD report for cytofkit on malbec2

This page was generated on 2018-10-29 10:12:30 -0400 (Mon, 29 Oct 2018).

Package 360/1642HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cytofkit 1.13.2
Jinmiao Chen , Matthew Myint
Snapshot Date: 2018-10-28 16:46:29 -0400 (Sun, 28 Oct 2018)
URL: https://git.bioconductor.org/packages/cytofkit
Branch: master
Last Commit: d13a480
Last Changed Date: 2018-09-24 12:08:52 -0400 (Mon, 24 Sep 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK [ ERROR ] skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: cytofkit
Version: 1.13.2
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data cytofkit
StartedAt: 2018-10-28 21:52:09 -0400 (Sun, 28 Oct 2018)
EndedAt: 2018-10-28 21:53:23 -0400 (Sun, 28 Oct 2018)
EllapsedTime: 73.9 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data cytofkit
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* checking for file ‘cytofkit/DESCRIPTION’ ... OK
* preparing ‘cytofkit’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: ggplot2
Registered S3 methods overwritten by 'ggplot2':
  method         from 
  [.quosures     rlang
  c.quosures     rlang
  print.quosures rlang
Registered S3 method overwritten by 'dplyr':
  method               from  
  as.data.frame.tbl_df tibble
Loading required package: plyr
Registered S3 method overwritten by 'xts':
  method     from
  as.zoo.xts zoo 
Run Rphenograph starts:
  -Input data of 100 rows and 52 columns
  -k is set to 30
Run Rphenograph DONE, took a total of 0.102000000000004s.
Quitting from lines 207-228 (cytofkit_example.Rmd) 
Error: processing vignette 'cytofkit_example.Rmd' failed with diagnostics:
Discrete value supplied to continuous scale
Execution halted