Renee X. de Menezes
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/SIM |
| Branch: RELEASE_3_9 |
| Last Commit: 2a0f4d9 |
| Last Changed Date: 2019-05-02 11:53:10 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:21:54 -0400 (Wed, 16 Oct 2019).
| Package 1522/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SIM 1.54.0 Renee X. de Menezes
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: SIM |
| Version: 1.54.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SIM_1.54.0.tar.gz && rm -rf SIM.buildbin-libdir && mkdir SIM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIM.buildbin-libdir SIM_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SIM_1.54.0.zip && rm SIM_1.54.0.tar.gz SIM_1.54.0.zip |
| StartedAt: 2019-10-15 19:10:23 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:12:47 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 143.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SIM_1.54.0.tar.gz && rm -rf SIM.buildbin-libdir && mkdir SIM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIM.buildbin-libdir SIM_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SIM_1.54.0.zip && rm SIM_1.54.0.tar.gz SIM_1.54.0.zip
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install for i386
* installing *source* package 'SIM' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c withinWindow.c -o withinWindow.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o SIM.dll tmp.def withinWindow.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/SIM.buildbin-libdir/00LOCK-SIM/00new/SIM/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SIM'
finding HTML links ... done
RESOURCERER.annotation.to.ID html
SIM-package html
acgh.data html
assemble.data html
chrom.table html
expr.data html
getoverlappingregions html
impute.nas.by.surrounding html
integrated.analysis html
link.metadata html
samples html
sim.plot.overlapping.indep.dep.features
html
sim.plot.pvals.on.genome html
sim.plot.pvals.on.region html
sim.plot.zoom.in html
sim.plot.zscore.heatmap html
sim.update.chrom.table html
tabulate.pvals html
tabulate.top.dep.features html
tabulate.top.indep.features html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SIM' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c withinWindow.c -o withinWindow.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o SIM.dll tmp.def withinWindow.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/SIM.buildbin-libdir/SIM/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SIM' as SIM_1.54.0.zip
* DONE (SIM)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'SIM' successfully unpacked and MD5 sums checked