Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

INSTALL report for RNASeqR on tokay2

This page was generated on 2018-10-23 02:11:36 -0400 (Tue, 23 Oct 2018).

Package 1316/1627HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RNASeqR 0.99.23
Kuan-Hao Chao
Snapshot Date: 2018-10-21 22:32:03 -0400 (Sun, 21 Oct 2018)
URL: https://git.bioconductor.org/packages/RNASeqR
Branch: master
Last Commit: e288d65
Last Changed Date: 2018-10-15 14:36:57 -0400 (Mon, 15 Oct 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK YES, package does not exist in internal repository.
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  ERROR  ERROR  skipped  skipped 

Summary

Package: RNASeqR
Version: 0.99.23
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RNASeqR_0.99.23.tar.gz && rm -rf RNASeqR.buildbin-libdir && mkdir RNASeqR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RNASeqR.buildbin-libdir RNASeqR_0.99.23.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RNASeqR_0.99.23.zip && rm RNASeqR_0.99.23.tar.gz RNASeqR_0.99.23.zip
StartedAt: 2018-10-22 04:02:15 -0400 (Mon, 22 Oct 2018)
EndedAt: 2018-10-22 04:03:16 -0400 (Mon, 22 Oct 2018)
EllapsedTime: 60.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RNASeqR_0.99.23.tar.gz && rm -rf RNASeqR.buildbin-libdir && mkdir RNASeqR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RNASeqR.buildbin-libdir RNASeqR_0.99.23.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RNASeqR_0.99.23.zip && rm RNASeqR_0.99.23.tar.gz RNASeqR_0.99.23.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2605k  100 2605k    0     0  28.9M      0 --:--:-- --:--:-- --:--:-- 31.4M

install for i386

* installing *source* package 'RNASeqR' ...
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RNASeqR'
    finding HTML links ... done
    CheckToolAll                            html  
    RNASeqDifferentialAnalysis              html  
    RNASeqDifferentialAnalysis_CMD          html  
    RNASeqEnvironmentSet                    html  
    RNASeqEnvironmentSet_CMD                html  
    RNASeqGoKegg                            html  
    RNASeqGoKegg_CMD                        html  
    RNASeqQualityAssessment                 html  
    RNASeqQualityAssessment_CMD             html  
    RNASeqR                                 html  
    RNASeqRParam-class                      html  
    RNASeqRParam-constructor                html  
    RNASeqReadProcess                       html  
    RNASeqReadProcess_CMD                   html  
    yeast                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'RNASeqR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RNASeqR' as RNASeqR_0.99.23.zip
* DONE (RNASeqR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'RNASeqR' successfully unpacked and MD5 sums checked
In R CMD INSTALL