Junpeng Zhang
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/miRSM |
| Branch: RELEASE_3_9 |
| Last Commit: 06c25e5 |
| Last Changed Date: 2019-09-10 23:02:58 -0400 (Tue, 10 Sep 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:42:13 -0400 (Wed, 16 Oct 2019).
| Package 1016/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| miRSM 1.2.2 Junpeng Zhang
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: miRSM |
| Version: 1.2.2 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/miRSM_1.2.2.tar.gz && rm -rf miRSM.buildbin-libdir && mkdir miRSM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRSM.buildbin-libdir miRSM_1.2.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL miRSM_1.2.2.zip && rm miRSM_1.2.2.tar.gz miRSM_1.2.2.zip |
| StartedAt: 2019-10-15 21:04:23 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 21:07:57 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 214.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/miRSM_1.2.2.tar.gz && rm -rf miRSM.buildbin-libdir && mkdir miRSM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRSM.buildbin-libdir miRSM_1.2.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL miRSM_1.2.2.zip && rm miRSM_1.2.2.tar.gz miRSM_1.2.2.zip
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install for i386
* installing *source* package 'miRSM' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c complex.c -o complex.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o miRSM.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/miRSM.buildbin-libdir/00LOCK-miRSM/00new/miRSM/libs/i386
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'miRSM'
finding HTML links ... done
BRCA_genes html
ceRExp html
cor_binary html
mRExp html
miRExp html
miRSM html
miRTarget html
module_CEA html
module_Coexpress html
module_FA html
module_GFA html
module_NMF html
module_ProNet html
module_Validate html
module_WGCNA html
module_biclust html
module_clust html
module_igraph html
module_miRdistribute html
module_miRsponge html
module_miRtarget html
share_miRs html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'miRSM' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c complex.c -o complex.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o miRSM.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/miRSM.buildbin-libdir/miRSM/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'miRSM' as miRSM_1.2.2.zip
* DONE (miRSM)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'miRSM' successfully unpacked and MD5 sums checked