Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 13:23:15 -0400 (Tue, 09 Apr 2019).
Package 939/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
metaArray 1.61.0 Hyungwon Choi
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] |
Package: metaArray |
Version: 1.61.0 |
Command: rm -rf metaArray.buildbin-libdir && mkdir metaArray.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh metaArray_1.61.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R metaArray.buildbin-libdir |
StartedAt: 2019-04-09 05:49:29 -0400 (Tue, 09 Apr 2019) |
EndedAt: 2019-04-09 05:50:43 -0400 (Tue, 09 Apr 2019) |
EllapsedTime: 74.7 seconds |
RetCode: 0 |
Status: OK |
PackageFile: metaArray_1.61.0.tgz |
PackageFileSize: 839.7 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf metaArray.buildbin-libdir && mkdir metaArray.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh metaArray_1.61.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R metaArray.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=metaArray.buildbin-libdir metaArray_1.61.0.tar.gz' >>>>>>> * installing *source* package ‘metaArray’ ... ** libs clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c contr.c -o contr.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c dproc.c -o dproc.o dproc.c:192:16: warning: unused variable 'nc' [-Wunused-variable] int num, nr, nc; ^ 1 warning generated. clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c dproc2.c -o dproc2.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c intcor.c -o intcor.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c lowess.c -o lowess.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c mmath.c -o mmath.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c perm.c -o perm.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -DUSEDOUBLE -fPIC -Wall -g -O2 -c poe.c -o poe.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o metaArray.so contr.o dproc.o dproc2.o intcor.o lowess.o mmath.o perm.o poe.o -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.9-bioc/meat/metaArray.buildbin-libdir/metaArray/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (metaArray) >>>>>>> >>>>>>> FIXING LINKS FOR metaArray.buildbin-libdir/metaArray/libs//metaArray.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgcc_s.1.dylib" "metaArray.buildbin-libdir/metaArray/libs//metaArray.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgfortran.3.dylib" "metaArray.buildbin-libdir/metaArray/libs//metaArray.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.5.2.dylib" "metaArray.buildbin-libdir/metaArray/libs//metaArray.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.dylib" "metaArray.buildbin-libdir/metaArray/libs//metaArray.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libquadmath.0.dylib" "metaArray.buildbin-libdir/metaArray/libs//metaArray.so"