Multiple platform build/check report for BioC 3.9 - CHECK report for graper on malbec2

Package: graper

Version: 1.0.0

Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.9-bioc/R/library --no-vignettes --timings graper_1.0.0.tar.gz

StartedAt: 2019-10-16 02:10:37 -0400 (Wed, 16 Oct 2019)

EndedAt: 2019-10-16 02:11:48 -0400 (Wed, 16 Oct 2019)

EllapsedTime: 71.4 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

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###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.9-bioc/R/library --no-vignettes --timings graper_1.0.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.9-bioc/meat/graper.Rcheck’
* using R version 3.6.1 (2019-07-05)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is  5.1Mb
  sub-directories of 1Mb or more:
    libs   5.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.9-bioc/meat/graper.Rcheck/00check.log’
for details.

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###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/BH/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/BH/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.9-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)


R version 3.6.1 (2019-07-05) -- "Action of the Toes"
Copyright (C) 2019 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-851.753
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-549.86
ELB improved by 301.892

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.918
ELB improved by 61.9426

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.276
ELB improved by 33.6421

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.558
ELB improved by 12.7177

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.267
ELB improved by 5.29144

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.084
ELB improved by 3.18279

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.723
ELB improved by 2.3606

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.768
ELB improved by 1.95529

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.029
ELB improved by 1.73911

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.416
ELB improved by 1.61228

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.886
ELB improved by 1.53079

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.409
ELB improved by 1.47688

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.964
ELB improved by 1.44433

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.534
ELB improved by 1.43064

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.102
ELB improved by 1.43214

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.661
ELB improved by 1.44108

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.216
ELB improved by 1.44512

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.786
ELB improved by 1.42947

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.406
ELB improved by 1.38006

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.118
ELB improved by 1.28758

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.966
ELB improved by 1.15197

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.982
ELB improved by 0.984886

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.175
ELB improved by 0.806684

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.537
ELB improved by 0.638357

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.043
ELB improved by 0.493686

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.665
ELB improved by 0.377402

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.377
ELB improved by 0.288215

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.155
ELB improved by 0.222158

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.981
ELB improved by 0.174394

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.84
ELB improved by 0.140186

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.725
ELB improved by 0.115528

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.628
ELB improved by 0.0974031

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.544
ELB improved by 0.083725

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.471
ELB improved by 0.0731172

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.406
ELB improved by 0.0646866

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.348
ELB improved by 0.0578473

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.296
ELB improved by 0.052205

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.248
ELB improved by 0.0474849

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.205
ELB improved by 0.0434898

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.165
ELB improved by 0.0400741

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.128
ELB improved by 0.0371287

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.093
ELB improved by 0.0345705

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.061
ELB improved by 0.0323358

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.031
ELB improved by 0.0303752

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.002
ELB improved by 0.0286498

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.975
ELB improved by 0.0271291

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.949
ELB improved by 0.0257886

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.924
ELB improved by 0.0246086

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.901
ELB improved by 0.0235732

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.878
ELB improved by 0.0226694

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.856
ELB improved by 0.0218865

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.835
ELB improved by 0.0212157

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.814
ELB improved by 0.0206501

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.794
ELB improved by 0.0201841

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.774
ELB improved by 0.0198132

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.755
ELB improved by 0.0195341

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.735
ELB improved by 0.0193448

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.716
ELB improved by 0.0192441

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.697
ELB improved by 0.0192317

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.678
ELB improved by 0.0193086

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.658
ELB improved by 0.0194764

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.638
ELB improved by 0.0197383

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.618
ELB improved by 0.0200982

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.598
ELB improved by 0.0205614

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.577
ELB improved by 0.0211345

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.555
ELB improved by 0.0218258

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.532
ELB improved by 0.0226451

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.509
ELB improved by 0.0236039

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.484
ELB improved by 0.0247162

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.458
ELB improved by 0.025998

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.43
ELB improved by 0.0274682

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.401
ELB improved by 0.0291485

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.37
ELB improved by 0.0310643

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.337
ELB improved by 0.0332441

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.301
ELB improved by 0.035721

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.263
ELB improved by 0.0385321

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.221
ELB improved by 0.0417188

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.176
ELB improved by 0.0453274

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.126
ELB improved by 0.0494079

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.072
ELB improved by 0.054014

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.013
ELB improved by 0.0592017

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.948
ELB improved by 0.0650274

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.876
ELB improved by 0.0715455

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.798
ELB improved by 0.0788051

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.711
ELB improved by 0.0868466

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.615
ELB improved by 0.0956979

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.51
ELB improved by 0.105372

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.394
ELB improved by 0.115868

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.267
ELB improved by 0.127174

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.127
ELB improved by 0.139281

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.975
ELB improved by 0.152203

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.809
ELB improved by 0.166018

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.628
ELB improved by 0.180934

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.431
ELB improved by 0.197384

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.215
ELB improved by 0.216188

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.976
ELB improved by 0.238737

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.709
ELB improved by 0.267066

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.406
ELB improved by 0.303236

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.059
ELB improved by 0.346848

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.668
ELB improved by 0.390838

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.246
ELB improved by 0.421999

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.814
ELB improved by 0.431896

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.391
ELB improved by 0.422765

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.991
ELB improved by 0.400205

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.62
ELB improved by 0.370856

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.277
ELB improved by 0.343339

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.954
ELB improved by 0.322808

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.649
ELB improved by 0.305151

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.37
ELB improved by 0.278815

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.133
ELB improved by 0.236986

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.947
ELB improved by 0.186205

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.809
ELB improved by 0.138325

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.708
ELB improved by 0.100171

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.636
ELB improved by 0.0725335

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.582
ELB improved by 0.0534394

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.542
ELB improved by 0.0405214

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.51
ELB improved by 0.0318663

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.484
ELB improved by 0.0261217

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.462
ELB improved by 0.022381

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.442
ELB improved by 0.0200481

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.423
ELB improved by 0.0187304

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.405
ELB improved by 0.0181641

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.386
ELB improved by 0.0181673

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.368
ELB improved by 0.0186139

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.348
ELB improved by 0.019427

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.328
ELB improved by 0.0205878

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.306
ELB improved by 0.0221576

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.281
ELB improved by 0.0243076

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.254
ELB improved by 0.027361

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.222
ELB improved by 0.0318545

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.184
ELB improved by 0.0386225

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.135
ELB improved by 0.0488299

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.071
ELB improved by 0.0636348

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.988
ELB improved by 0.0827165

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.887
ELB improved by 0.101289

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.778
ELB improved by 0.109274

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.678
ELB improved by 0.0993881

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.602
ELB improved by 0.0765804

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.549
ELB improved by 0.0523736

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.516
ELB improved by 0.0337685

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.494
ELB improved by 0.0216482

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.48
ELB improved by 0.014341

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.47
ELB improved by 0.0100394

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.462
ELB improved by 0.00748227

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-920.084
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.838
ELB improved by 331.247

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-532.522
ELB improved by 56.316

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-497.175
ELB improved by 35.3466

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.963
ELB improved by 16.212

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.122
ELB improved by 6.84087

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.228
ELB improved by 3.89456

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.054
ELB improved by 3.17372

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.971
ELB improved by 3.08297

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.743
ELB improved by 3.22835

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.335
ELB improved by 3.40757

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.912
ELB improved by 3.42339

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.782
ELB improved by 3.12949

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.221
ELB improved by 2.56156

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.293
ELB improved by 1.92752

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.875
ELB improved by 1.41775

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.789
ELB improved by 1.08662

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.889
ELB improved by 0.90015

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.075
ELB improved by 0.813438

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.277
ELB improved by 0.797937

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.438
ELB improved by 0.839569

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.518
ELB improved by 0.919651

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.531
ELB improved by 0.987207

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.533
ELB improved by 0.997773

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.565
ELB improved by 0.968195

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.64
ELB improved by 0.924437

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.766
ELB improved by 0.874817

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.942
ELB improved by 0.823194

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.169
ELB improved by 0.773553

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.439
ELB improved by 0.729905

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.743
ELB improved by 0.696288

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.066
ELB improved by 0.676662

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.392
ELB improved by 0.674069

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.703
ELB improved by 0.688931

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.986
ELB improved by 0.717092

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.238
ELB improved by 0.747523

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.483
ELB improved by 0.755833

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.782
ELB improved by 0.700528

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.215
ELB improved by 0.566983

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.805
ELB improved by 0.409964

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.52
ELB improved by 0.284609

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.32
ELB improved by 0.200226

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.174
ELB improved by 0.145822

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.064
ELB improved by 0.110313

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.978
ELB improved by 0.0863563

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.908
ELB improved by 0.0695358

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.851
ELB improved by 0.0572513

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.803
ELB improved by 0.0479673

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.762
ELB improved by 0.0407522

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.727
ELB improved by 0.0350137

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.697
ELB improved by 0.0303563

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.67
ELB improved by 0.0265084

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.647
ELB improved by 0.0232833

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.627
ELB improved by 0.0205532

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.608
ELB improved by 0.0182302

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.592
ELB improved by 0.0162505

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.578
ELB improved by 0.0145636

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.564
ELB improved by 0.0131271

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.552
ELB improved by 0.0119031

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.542
ELB improved by 0.0108581

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.532
ELB improved by 0.00996276

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-883.942
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.462
ELB improved by 312.48

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.119
ELB improved by 55.3429

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.614
ELB improved by 30.5045

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.123
ELB improved by 12.4909

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.519
ELB improved by 5.6043

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.743
ELB improved by 3.77575

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.251
ELB improved by 3.49234

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.649
ELB improved by 3.60215

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.821
ELB improved by 3.82732

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.865
ELB improved by 3.95605

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.107
ELB improved by 3.75841

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.945
ELB improved by 3.16197

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.555
ELB improved by 2.38946

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.819
ELB improved by 1.73604

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.542
ELB improved by 1.27707

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.613
ELB improved by 0.929561

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.957
ELB improved by 0.655607

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.495
ELB improved by 0.461911

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.159
ELB improved by 0.336136

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.903
ELB improved by 0.256085

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.698
ELB improved by 0.204636

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.528
ELB improved by 0.170442

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.382
ELB improved by 0.146457

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.253
ELB improved by 0.128624

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.138
ELB improved by 0.114703

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.035
ELB improved by 0.103449

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.941
ELB improved by 0.0941324

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.854
ELB improved by 0.0862998

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.775
ELB improved by 0.0796454

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.701
ELB improved by 0.0739512

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.632
ELB improved by 0.0690536

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.567
ELB improved by 0.0648255

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.506
ELB improved by 0.0611656

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.448
ELB improved by 0.0579913

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.392
ELB improved by 0.0552349

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.34
ELB improved by 0.0528394

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.289
ELB improved by 0.0507573

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.24
ELB improved by 0.0489482

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.193
ELB improved by 0.0473775

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.147
ELB improved by 0.0460157

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.102
ELB improved by 0.0448376

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.058
ELB improved by 0.0438215

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.015
ELB improved by 0.042949

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.973
ELB improved by 0.0422045

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.931
ELB improved by 0.0415749

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.89
ELB improved by 0.0410496

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.849
ELB improved by 0.0406206

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.809
ELB improved by 0.0402816

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.769
ELB improved by 0.0400291

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.729
ELB improved by 0.0398616

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.69
ELB improved by 0.0397799

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.65
ELB improved by 0.0397875

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.61
ELB improved by 0.0398907

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.57
ELB improved by 0.0400987

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.529
ELB improved by 0.0404243

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.488
ELB improved by 0.0408843

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.447
ELB improved by 0.0415007

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.405
ELB improved by 0.0423016

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.361
ELB improved by 0.0433227

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.317
ELB improved by 0.04461

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.27
ELB improved by 0.0462227

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.222
ELB improved by 0.0482379

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.171
ELB improved by 0.050758

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.118
ELB improved by 0.0539207

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.06
ELB improved by 0.0579156

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.997
ELB improved by 0.0630102

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.927
ELB improved by 0.0695931

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.849
ELB improved by 0.0782469

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.759
ELB improved by 0.0898782

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.653
ELB improved by 0.10595

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.524
ELB improved by 0.128898

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.361
ELB improved by 0.162801

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.147
ELB improved by 0.214025

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.858
ELB improved by 0.28956

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.472
ELB improved by 0.385719

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.004
ELB improved by 0.467856

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.51
ELB improved by 0.494227

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.031
ELB improved by 0.479188

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.574
ELB improved by 0.456563

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.14
ELB improved by 0.43367

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.733
ELB improved by 0.406979

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.36
ELB improved by 0.373728

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.026
ELB improved by 0.333411

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.739
ELB improved by 0.287725

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.499
ELB improved by 0.240055

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.304
ELB improved by 0.19432

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.151
ELB improved by 0.153663

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.031
ELB improved by 0.119702

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.938
ELB improved by 0.0925955

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.867
ELB improved by 0.0715736

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.811
ELB improved by 0.0555072

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.768
ELB improved by 0.0432868

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.734
ELB improved by 0.0339864

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.707
ELB improved by 0.0268903

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.686
ELB improved by 0.0214609

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.668
ELB improved by 0.017295

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.654
ELB improved by 0.014088

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.643
ELB improved by 0.0116084

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.633
ELB improved by 0.00967991

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-842.762
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.267
ELB improved by 278.495

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.274
ELB improved by 64.9932

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.979
ELB improved by 42.2951

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.049
ELB improved by 15.9298

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.259
ELB improved by 5.78965

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.097
ELB improved by 3.1623

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.877
ELB improved by 2.21995

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.086
ELB improved by 1.79107

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.525
ELB improved by 1.56118

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.104
ELB improved by 1.42043

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.778
ELB improved by 1.32637

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.515
ELB improved by 1.26326

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.288
ELB improved by 1.22686

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.071
ELB improved by 1.21667

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.839
ELB improved by 1.23158

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.572
ELB improved by 1.267

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.26
ELB improved by 1.31281

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.908
ELB improved by 1.35167

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.551
ELB improved by 1.35744

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.25
ELB improved by 1.30014

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.081
ELB improved by 1.16933

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.084
ELB improved by 0.996571

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.248
ELB improved by 0.836161

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.531
ELB improved by 0.717079

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.908
ELB improved by 0.623535

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.372
ELB improved by 0.535281

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.908
ELB improved by 0.46482

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.479
ELB improved by 0.428292

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.054
ELB improved by 0.424963

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.606
ELB improved by 0.44814

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.114
ELB improved by 0.492397

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.559
ELB improved by 0.554388

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.927
ELB improved by 0.632629

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.199
ELB improved by 0.727791

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.355
ELB improved by 0.843812

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.365
ELB improved by 0.989686

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.185
ELB improved by 1.18011

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.761
ELB improved by 1.42464

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.08
ELB improved by 1.68032

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.244
ELB improved by 1.83665

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.324
ELB improved by 1.91969

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.25
ELB improved by 2.0737

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.927
ELB improved by 2.32301

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.325
ELB improved by 2.60244

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.03
ELB improved by 2.29453

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.519
ELB improved by 1.51189

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.635
ELB improved by 0.883876

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.078
ELB improved by 0.55692

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.641
ELB improved by 0.436227

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.192
ELB improved by 0.449155

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.64
ELB improved by 0.552528

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.095
ELB improved by 0.545105

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.757
ELB improved by 0.33754

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.582
ELB improved by 0.175335

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.481
ELB improved by 0.100494

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.415
ELB improved by 0.066004

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.367
ELB improved by 0.0480024

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.33
ELB improved by 0.0372668

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.3
ELB improved by 0.0301012

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.275
ELB improved by 0.0249082

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.254
ELB improved by 0.0209345

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.236
ELB improved by 0.0177884

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.221
ELB improved by 0.0152442

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.208
ELB improved by 0.0131588

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.196
ELB improved by 0.0114343

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.186
ELB improved by 0.00999941

ELB converged
══ testthat results  ═══════════════════════════════════════════════════════════
[ OK: 24 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ]
> 
> proc.time()
   user  system elapsed 
  2.809   0.130   2.997

name	user	system	elapsed
coef.graper	0.083	0.000	0.188
getPIPs	0.069	0.008	0.084
graper	0.118	0.016	0.136
makeExampleData	0.020	0.000	0.021
makeExampleDataWithUnequalGroups	0.020	0.004	0.023
plotELBO	0.302	0.004	0.307
plotGroupPenalties	0.935	0.000	0.936
plotPosterior	0.847	0.004	0.858
predict.graper	2.889	0.016	2.922
print.graper	0.063	0.004	0.067

CHECK report for graper on malbec2

Summary

Command output

Installation output

Tests output

Example timings