Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:37:56 -0400 (Wed, 16 Oct 2019).
Package 1151/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Organism.dplyr 1.12.1 Martin Morgan
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: Organism.dplyr |
Version: 1.12.1 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Organism.dplyr_1.12.1.tar.gz && rm -rf Organism.dplyr.buildbin-libdir && mkdir Organism.dplyr.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Organism.dplyr.buildbin-libdir Organism.dplyr_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Organism.dplyr_1.12.1.zip && rm Organism.dplyr_1.12.1.tar.gz Organism.dplyr_1.12.1.zip |
StartedAt: 2019-10-15 20:43:32 -0400 (Tue, 15 Oct 2019) |
EndedAt: 2019-10-15 20:44:42 -0400 (Tue, 15 Oct 2019) |
EllapsedTime: 70.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Organism.dplyr_1.12.1.tar.gz && rm -rf Organism.dplyr.buildbin-libdir && mkdir Organism.dplyr.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Organism.dplyr.buildbin-libdir Organism.dplyr_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Organism.dplyr_1.12.1.zip && rm Organism.dplyr_1.12.1.tar.gz Organism.dplyr_1.12.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 189k 100 189k 0 0 2786k 0 --:--:-- --:--:-- --:--:-- 3158k install for i386 * installing *source* package 'Organism.dplyr' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Organism.dplyr' finding HTML links ... done Genomic-Extractors html finding level-2 HTML links ... done filter html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/filter.Rd:152: file link 'transcripts_tbl' in package 'Organism.dplyr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/filter.Rd:155: file link 'select,src_organism-method' in package 'Organism.dplyr' does not exist and so has been treated as a topic select html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/select.Rd:137: file link 'transcripts_tbl' in package 'Organism.dplyr' does not exist and so has been treated as a topic src html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/src.Rd:126: file link 'transcripts_tbl' in package 'Organism.dplyr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa4xO2q/R.INSTALL248c4022b43/Organism.dplyr/man/src.Rd:129: file link 'select,src_organism-method' in package 'Organism.dplyr' does not exist and so has been treated as a topic utils html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Organism.dplyr' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Organism.dplyr' as Organism.dplyr_1.12.1.zip * DONE (Organism.dplyr) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'Organism.dplyr' successfully unpacked and MD5 sums checked