Lasse Folkersen
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/GeneRegionScan |
| Branch: RELEASE_3_9 |
| Last Commit: dcb8e17 |
| Last Changed Date: 2019-05-02 11:53:11 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:22:35 -0400 (Wed, 16 Oct 2019).
| Package 637/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GeneRegionScan 1.40.0 Lasse Folkersen
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: GeneRegionScan |
| Version: 1.40.0 |
| Command: rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.40.0.tar.gz |
| StartedAt: 2019-10-16 09:17:16 -0400 (Wed, 16 Oct 2019) |
| EndedAt: 2019-10-16 09:18:36 -0400 (Wed, 16 Oct 2019) |
| EllapsedTime: 79.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: GeneRegionScan_1.40.0.zip |
| PackageFileSize: 7.584 MiB |
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### Running command:
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### rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.40.0.tar.gz
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install for i386
* installing *source* package 'GeneRegionScan' ...
** using staged installation
** R
** data
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GeneRegionScan'
finding HTML links ... done
Nondocumented-objects html
ProbeLevelSet-class html
addSnpPdata html
checkForFileInPath html
doProbeLinear html
doProbeTTest html
exampleProbeLevelSet html
excludeDoubleMatchingProbes html
exonStructure html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpIvrzvh/R.INSTALLe246dad3280/GeneRegionScan/man/exonStructure.rd:21: file link 'DNAString' in package 'Biostrings' does not exist and so has been treated as a topic
findProbePositions html
findSequenceInGenome html
geneRegionScan html
genomic html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpIvrzvh/R.INSTALLe246dad3280/GeneRegionScan/man/genomic.Rd:13: file link 'readDNAStringSet' in package 'Biostrings' does not exist and so has been treated as a topic
getLocalMetaprobeIntensities html
getLocalProbeIntensities html
getMetaprobesetsFromRegionOfInterest html
getProbeLevelAnnotationForExonArrays html
getProbesetsFromMetaprobeset html
getProbesetsFromRegionOfInterest html
getSequence html
getServerProbeIntensities html
mrna html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpIvrzvh/R.INSTALLe246dad3280/GeneRegionScan/man/mrna.Rd:12: file link 'readDNAStringSet' in package 'Biostrings' does not exist and so has been treated as a topic
plotCoexpression html
plotOnGene html
plotStatistics html
readGeneInput html
translateSampleNames html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeneRegionScan' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneRegionScan' as GeneRegionScan_1.40.0.zip
* DONE (GeneRegionScan)