Malte Thodberg
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/CAGEfightR |
| Branch: RELEASE_3_9 |
| Last Commit: 90e6c25 |
| Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:41:28 -0400 (Wed, 16 Oct 2019).
| Package 200/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CAGEfightR 1.4.0 Malte Thodberg
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: CAGEfightR |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CAGEfightR_1.4.0.tar.gz && rm -rf CAGEfightR.buildbin-libdir && mkdir CAGEfightR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAGEfightR.buildbin-libdir CAGEfightR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CAGEfightR_1.4.0.zip && rm CAGEfightR_1.4.0.tar.gz CAGEfightR_1.4.0.zip |
| StartedAt: 2019-10-15 20:58:28 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 21:01:13 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 165.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CAGEfightR_1.4.0.tar.gz && rm -rf CAGEfightR.buildbin-libdir && mkdir CAGEfightR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAGEfightR.buildbin-libdir CAGEfightR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CAGEfightR_1.4.0.zip && rm CAGEfightR_1.4.0.tar.gz CAGEfightR_1.4.0.zip
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install for i386
* installing *source* package 'CAGEfightR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CAGEfightR'
finding HTML links ... done
assignGeneID html
assignMissingID html
assignTxID html
assignTxType html
balanceBC html
balanceD html
bwCommonGenome html
bwGenomeCompatibility html
bwValid html
calcBidirectionality html
calcComposition html
calcPooled html
calcShape html
calcSupport html
calcTPM html
calcTotalTags html
checkPeaked html
checkPooled html
clusterBidirectionally html
clusterUnidirectionally html
combineClusters html
exampleDesign html
findLinks html
findStretches html
quantifyCTSSs html
quantifyClusters html
quantifyGenes html
quickEnhancers html
quickTSSs html
shapeEntropy html
shapeIQR html
shapeMultimodality html
subsetByBidirectionality html
subsetByComposition html
subsetBySupport html
swapRanges html
swapScores html
trackBalance html
trackCTSS html
trackClusters html
trackLinks html
trimToPeak html
trimToPercentiles html
tuneTagClustering html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CAGEfightR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CAGEfightR' as CAGEfightR_1.4.0.zip
* DONE (CAGEfightR)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CAGEfightR' successfully unpacked and MD5 sums checked