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This page was generated on 2019-04-09 11:54:48 -0400 (Tue, 09 Apr 2019).
Package 939/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
metaArray 1.61.0 Hyungwon Choi
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: metaArray |
Version: 1.61.0 |
Command: rm -rf metaArray.buildbin-libdir && mkdir metaArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metaArray.buildbin-libdir metaArray_1.61.0.tar.gz |
StartedAt: 2019-04-09 08:25:53 -0400 (Tue, 09 Apr 2019) |
EndedAt: 2019-04-09 08:26:42 -0400 (Tue, 09 Apr 2019) |
EllapsedTime: 49.3 seconds |
RetCode: 0 |
Status: OK |
PackageFile: metaArray_1.61.0.zip |
PackageFileSize: 865.7 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf metaArray.buildbin-libdir && mkdir metaArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metaArray.buildbin-libdir metaArray_1.61.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'metaArray' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c contr.c -o contr.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c dproc.c -o dproc.o dproc.c: In function 'malloc_CH': dproc.c:111:21: warning: variable 'num' set but not used [-Wunused-but-set-variable] int i, j, nr, nc, num; ^ dproc.c: In function 'free_CH': dproc.c:192:16: warning: unused variable 'nc' [-Wunused-variable] int num, nr, nc; ^ dproc.c:192:12: warning: variable 'nr' set but not used [-Wunused-but-set-variable] int num, nr, nc; ^ dproc.c:192:7: warning: variable 'num' set but not used [-Wunused-but-set-variable] int num, nr, nc; ^ C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c dproc2.c -o dproc2.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c intcor.c -o intcor.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c lowess.c -o lowess.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c mmath.c -o mmath.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c perm.c -o perm.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=generic -c poe.c -o poe.o poe.c: In function 'poe_one_iter': poe.c:131:53: warning: variable 'shift' set but not used [-Wunused-but-set-variable] double kappa_b, kappa_a, kappa_new, aaa, res_max, shift; ^ poe.c:120:20: warning: variable 'accept' set but not used [-Wunused-but-set-variable] int nr,nc,tt,gg, accept; ^ C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o metaArray.dll tmp.def contr.o dproc.o dproc2.o intcor.o lowess.o mmath.o perm.o poe.o -lm -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/metaArray.buildbin-libdir/00LOCK-metaArray/00new/metaArray/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'metaArray' finding HTML links ... done Zscore html em.draw html find.init html fit.em html intcor html logit html mdata html poe.em html poe.mcmc html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'metaArray' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c contr.c -o contr.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c dproc.c -o dproc.o dproc.c: In function 'malloc_CH': dproc.c:111:21: warning: variable 'num' set but not used [-Wunused-but-set-variable] int i, j, nr, nc, num; ^ dproc.c: In function 'free_CH': dproc.c:192:16: warning: unused variable 'nc' [-Wunused-variable] int num, nr, nc; ^ dproc.c:192:12: warning: variable 'nr' set but not used [-Wunused-but-set-variable] int num, nr, nc; ^ dproc.c:192:7: warning: variable 'num' set but not used [-Wunused-but-set-variable] int num, nr, nc; ^ C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c dproc2.c -o dproc2.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c intcor.c -o intcor.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c lowess.c -o lowess.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c mmath.c -o mmath.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c perm.c -o perm.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=generic -c poe.c -o poe.o poe.c: In function 'poe_one_iter': poe.c:131:53: warning: variable 'shift' set but not used [-Wunused-but-set-variable] double kappa_b, kappa_a, kappa_new, aaa, res_max, shift; ^ poe.c:120:20: warning: variable 'accept' set but not used [-Wunused-but-set-variable] int nr,nc,tt,gg, accept; ^ C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o metaArray.dll tmp.def contr.o dproc.o dproc2.o intcor.o lowess.o mmath.o perm.o poe.o -lm -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/metaArray.buildbin-libdir/metaArray/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'metaArray' as metaArray_1.61.0.zip * DONE (metaArray)