Mike Jiang
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/flowViz |
| Branch: master |
| Last Commit: 3b6fc83 |
| Last Changed Date: 2019-02-15 15:13:00 -0400 (Fri, 15 Feb 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 11:55:26 -0400 (Tue, 09 Apr 2019).
| Package 575/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| flowViz 1.47.4 Mike Jiang
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: flowViz |
| Version: 1.47.4 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/flowViz_1.47.4.tar.gz && rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowViz.buildbin-libdir flowViz_1.47.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL flowViz_1.47.4.zip && rm flowViz_1.47.4.tar.gz flowViz_1.47.4.zip |
| StartedAt: 2019-04-08 19:09:09 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 19:10:52 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 103.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/flowViz_1.47.4.tar.gz && rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowViz.buildbin-libdir flowViz_1.47.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL flowViz_1.47.4.zip && rm flowViz_1.47.4.tar.gz flowViz_1.47.4.zip
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install for i386
* installing *source* package 'flowViz' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'flowViz'
finding HTML links ... done
addName-methods html
contour-methods html
densityplot html
ecdfplot html
flowPlot html
flowViz-package html
flowViz.par.get html
glines-methods html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glines-methods.Rd:86: file link 'kmeansFilter' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glines-methods.Rd:98: file link 'polygonGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glines-methods.Rd:105: file link 'quadGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glines-methods.Rd:112: file link 'rectangleGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glines-methods.Rd:119: file link 'rectangleGate' in package 'flowCore' does not exist and so has been treated as a topic
glpoints-methods html
glpolygon-methods html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glpolygon-methods.Rd:118: file link 'kmeansFilter' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glpolygon-methods.Rd:130: file link 'polygonGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glpolygon-methods.Rd:137: file link 'quadGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glpolygon-methods.Rd:144: file link 'rectangleGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/glpolygon-methods.Rd:151: file link 'rectangleGate' in package 'flowCore' does not exist and so has been treated as a topic
gpoints-methods html
gpolygon-methods html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/gpolygon-methods.Rd:111: file link 'kmeansFilter' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/gpolygon-methods.Rd:123: file link 'polygonGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/gpolygon-methods.Rd:130: file link 'quadGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/gpolygon-methods.Rd:137: file link 'rectangleGate' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/gpolygon-methods.Rd:144: file link 'ellipsoidGate' in package 'flowCore' does not exist and so has been treated as a topic
lattice-methods html
plot html
splom html
timeLinePlot html
xyplot html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/xyplot.Rd:104: file link 'filtersList-class' in package 'flowCore' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpu2NYIV/R.INSTALL137449a85a24/flowViz/man/xyplot.Rd:174: file link 'sqrt' in package 'base' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
'filters.Rmd'
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'flowViz' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowViz' as flowViz_1.47.4.zip
* DONE (flowViz)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'flowViz' successfully unpacked and MD5 sums checked