Package: clstutils

Version: 1.31.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/clstutils_1.31.0.tar.gz && rm -rf clstutils.buildbin-libdir && mkdir clstutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clstutils.buildbin-libdir clstutils_1.31.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL clstutils_1.31.0.zip && rm clstutils_1.31.0.tar.gz clstutils_1.31.0.zip

StartedAt: 2019-04-08 18:58:52 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 18:59:30 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 37.8 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/clstutils_1.31.0.tar.gz && rm -rf clstutils.buildbin-libdir && mkdir clstutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clstutils.buildbin-libdir clstutils_1.31.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL clstutils_1.31.0.zip && rm clstutils_1.31.0.tar.gz clstutils_1.31.0.zip
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install for i386

* installing *source* package 'clstutils' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'clstutils'
    finding HTML links ... done
    classifyPlacements                      html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp4Aklbr/R.INSTALL158415ab3ccf/clstutils/man/classifyPlacements.Rd:31: file link 'classifyIter' in package 'clst' does not exist and so has been treated as a topic
    clstutils-package                       html  
    finding level-2 HTML links ... done

    findOutliers                            html  
    maxDists                                html  
    prettyTree                              html  
    refpkgContents                          html  
    seqdat                                  html  
    seqs                                    html  
    taxonomyFromRefpkg                      html  
    treeDists                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'clstutils' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clstutils' as clstutils_1.31.0.zip
* DONE (clstutils)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'clstutils' successfully unpacked and MD5 sums checked