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INSTALL report for TEQC on tokay2

This page was generated on 2019-04-09 11:58:45 -0400 (Tue, 09 Apr 2019).

Package 1602/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TEQC 4.5.0
Manuela Hummel
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/TEQC
Branch: master
Last Commit: 679db47
Last Changed Date: 2018-10-30 11:54:29 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: TEQC
Version: 4.5.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TEQC_4.5.0.tar.gz && rm -rf TEQC.buildbin-libdir && mkdir TEQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TEQC.buildbin-libdir TEQC_4.5.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TEQC_4.5.0.zip && rm TEQC_4.5.0.tar.gz TEQC_4.5.0.zip
StartedAt: 2019-04-08 19:58:35 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 19:59:44 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 68.7 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TEQC_4.5.0.tar.gz && rm -rf TEQC.buildbin-libdir && mkdir TEQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TEQC.buildbin-libdir TEQC_4.5.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TEQC_4.5.0.zip && rm TEQC_4.5.0.tar.gz TEQC_4.5.0.zip
###
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100  276k  100  276k    0     0  4070k      0 --:--:-- --:--:-- --:--:-- 4525k

install for i386

* installing *source* package 'TEQC' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TEQC'
    finding HTML links ... done
    TEQCreport                              html  
    chrom.barplot                           html  
    coverage.GC                             html  
    coverage.correlation                    html  
    coverage.density                        html  
    coverage.hist                           html  
    coverage.plot                           html  
    coverage.target                         html  
    coverage.targetlength.plot              html  
    coverage.uniformity                     html  
    covered.k                               html  
    duplicates.barplot                      html  
    fraction.reads.target                   html  
    fraction.target                         html  
    get.baits                               html  
    get.reads                               html  
    get.targets                             html  
    insert.size.hist                        html  
    make.wigfiles                           html  
    multiTEQCreport                         html  
    reads2pairs                             html  
    readsPerTarget                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TEQC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TEQC' as TEQC_4.5.0.zip
* DONE (TEQC)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'TEQC' successfully unpacked and MD5 sums checked