Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 12:10:14 -0400 (Tue, 09 Apr 2019).
Package 1595/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
TCC 1.23.2 Jianqiang Sun
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: TCC |
Version: 1.23.2 |
Command: rm -rf TCC.buildbin-libdir && mkdir TCC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCC.buildbin-libdir TCC_1.23.2.tar.gz |
StartedAt: 2019-04-09 09:04:56 -0400 (Tue, 09 Apr 2019) |
EndedAt: 2019-04-09 09:06:58 -0400 (Tue, 09 Apr 2019) |
EllapsedTime: 122.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: TCC_1.23.2.zip |
PackageFileSize: 1.824 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf TCC.buildbin-libdir && mkdir TCC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCC.buildbin-libdir TCC_1.23.2.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'TCC' ... ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'calcNormFactors' in package 'TCC' ** help *** installing help indices converting help for package 'TCC' finding HTML links ... done ROKU html TCC-class html TCC html WAD html arab html calcAUCValue html calcNormFactors html clusterSample html estimateDE html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCY9PJ0/R.INSTALL155434a836c5/TCC/man/estimateDE.Rd:66: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCY9PJ0/R.INSTALL155434a836c5/TCC/man/estimateDE.Rd:73: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCY9PJ0/R.INSTALL155434a836c5/TCC/man/estimateDE.Rd:81: file link 'getPriors.NB' in package 'baySeq' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCY9PJ0/R.INSTALL155434a836c5/TCC/man/estimateDE.Rd:128: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCY9PJ0/R.INSTALL155434a836c5/TCC/man/estimateDE.Rd:152: file link 'getPriors.NB' in package 'baySeq' does not exist and so has been treated as a topic filterLowCountGenes html getNormalizedData html getResult html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCY9PJ0/R.INSTALL155434a836c5/TCC/man/getResult.Rd:20: file link 'plot' in package 'TCC' does not exist and so has been treated as a topic hypoData html hypoData_mg html hypoData_ts html makeFCMatrix html nakai html plot.TCC html plotFCPseudocolor html simulateReadCounts html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TCC' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'TCC' as TCC_1.23.2.zip * DONE (TCC)