Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:16:10 -0400 (Tue, 09 Apr 2019).
Package 1525/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
SomaticSignatures 2.19.1 Julian Gehring
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: SomaticSignatures |
Version: 2.19.1 |
Command: rm -rf SomaticSignatures.buildbin-libdir && mkdir SomaticSignatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SomaticSignatures.buildbin-libdir SomaticSignatures_2.19.1.tar.gz |
StartedAt: 2019-04-09 09:00:36 -0400 (Tue, 09 Apr 2019) |
EndedAt: 2019-04-09 09:01:58 -0400 (Tue, 09 Apr 2019) |
EllapsedTime: 82.5 seconds |
RetCode: 0 |
Status: OK |
PackageFile: SomaticSignatures_2.19.1.zip |
PackageFileSize: 1.303 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf SomaticSignatures.buildbin-libdir && mkdir SomaticSignatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SomaticSignatures.buildbin-libdir SomaticSignatures_2.19.1.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'SomaticSignatures' ... ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SomaticSignatures' finding HTML links ... done MutationalSignatures-class html SomaticSignatures-package html cluster-spetrum html decomposition-functions html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpyaGJYf/R.INSTALL244014c71e45/SomaticSignatures/man/decomposition-functions.Rd:75: file link 'NMF' in package 'NMF' does not exist and so has been treated as a topic gc html granges-utils html finding level-2 HTML links ... done hs-chrs html kmers-data html kmers html motif-functions html mutation-context html mutation-distribution html mutational-normalization html mutational-plots html mutational-signatures html mutect html number-signatures html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpyaGJYf/R.INSTALL244014c71e45/SomaticSignatures/man/number-signatures.Rd:98: file link 'evar' in package 'NMF' does not exist and so has been treated as a topic sca-data html signature-plot-functions html signatures21-data html utils html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SomaticSignatures' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'SomaticSignatures' as SomaticSignatures_2.19.1.zip * DONE (SomaticSignatures)