Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 12:26:57 -0400 (Tue, 09 Apr 2019).
Package 1297/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
RCAS 1.9.0 Bora Uyar
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: RCAS |
Version: 1.9.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RCAS_1.9.0.tar.gz && rm -rf RCAS.buildbin-libdir && mkdir RCAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCAS.buildbin-libdir RCAS_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RCAS_1.9.0.zip && rm RCAS_1.9.0.tar.gz RCAS_1.9.0.zip |
StartedAt: 2019-04-08 20:12:57 -0400 (Mon, 08 Apr 2019) |
EndedAt: 2019-04-08 20:14:25 -0400 (Mon, 08 Apr 2019) |
EllapsedTime: 87.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RCAS_1.9.0.tar.gz && rm -rf RCAS.buildbin-libdir && mkdir RCAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCAS.buildbin-libdir RCAS_1.9.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RCAS_1.9.0.zip && rm RCAS_1.9.0.tar.gz RCAS_1.9.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1694k 100 1694k 0 0 17.3M 0 --:--:-- --:--:-- --:--:-- 18.3M install for i386 * installing *source* package 'RCAS' ... ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built. ** help *** installing help indices converting help for package 'RCAS' finding HTML links ... done calculateCoverageProfile html calculateCoverageProfileFromTxdb html calculateCoverageProfileList html calculateCoverageProfileListFromTxdb html createControlRegions html createDB html createOrthologousGeneSetList html deleteSampleDataFromDB html discoverFeatureSpecificMotifs html extractSequences html geneSets html getFeatureBoundaryCoverage html getFeatureBoundaryCoverageBin html getFeatureBoundaryCoverageMulti html getIntervalOverlapMatrix html getMotifSummaryTable html getTargetedGenesTable html getTxdbFeatures html getTxdbFeaturesFromGRanges html gff html importBed html importBedFiles html importGtf html parseMsigdb html plotFeatureBoundaryCoverage html printMsigdbDataset html queryGff html queryRegions html retrieveOrthologs html runGSEA html runMotifRG html runReport html runReportMetaAnalysis html runTopGO html summarizeDatabaseContent html summarizeQueryRegions html summarizeQueryRegionsMulti html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built. ** testing if installed package can be loaded from final location groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built. ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RCAS' ... ** testing if installed package can be loaded groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built. * MD5 sums packaged installation of 'RCAS' as RCAS_1.9.0.zip * DONE (RCAS) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'RCAS' successfully unpacked and MD5 sums checked