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INSTALL report for MetCirc on tokay2

This page was generated on 2019-04-09 12:26:47 -0400 (Tue, 09 Apr 2019).

Package 954/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MetCirc 1.13.2
Thomas Naake
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/MetCirc
Branch: master
Last Commit: 22985a2
Last Changed Date: 2019-04-04 14:09:25 -0400 (Thu, 04 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: MetCirc
Version: 1.13.2
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/MetCirc_1.13.2.tar.gz && rm -rf MetCirc.buildbin-libdir && mkdir MetCirc.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MetCirc.buildbin-libdir MetCirc_1.13.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL MetCirc_1.13.2.zip && rm MetCirc_1.13.2.tar.gz MetCirc_1.13.2.zip
StartedAt: 2019-04-08 18:41:43 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:43:05 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 82.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/MetCirc_1.13.2.tar.gz && rm -rf MetCirc.buildbin-libdir && mkdir MetCirc.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MetCirc.buildbin-libdir MetCirc_1.13.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL MetCirc_1.13.2.zip && rm MetCirc_1.13.2.tar.gz MetCirc_1.13.2.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1576k  100 1576k    0     0  7630k      0 --:--:-- --:--:-- --:--:-- 7920k

install for i386

* installing *source* package 'MetCirc' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MetCirc'
    finding HTML links ... done
    MSP                                     html  
    NDP                                     html  
    adduct-set                              html  
    adduct                                  html  
    allocatePrecursor2mz                    html  
    binnedMSP                               html  
    binning                                 html  
    cart2Polar                              html  
    circosLegend                            html  
    classes-set                             html  
    classes                                 html  
    combine                                 html  
    compartmentTissue                       html  
    convert2MSP                             html  
    convertExampleDF                        html  
    convertMSP2MSP                          html  
    createLink0Matrix                       html  
    createLinkMatrix                        html  
    createOrderedSimMat                     html  
    createSimilarityMatrix                  html  
    cutLinkMatrix                           html  
    cutUniquePrecursor                      html  
    extract-methods                         html  
    getBegEndIndMSP                         html  
    getLinkMatrixIndices                    html  
    getPrecursorMZ                          html  
    getRT                                   html  
    highlight                               html  
    idMSMStoMSP-data                        html  
    information-set                         html  
    information                             html  
    length-method                           html  
    minFragCart2Polar                       html  
    msp2FunctionalLossesMSP                 html  
    msp2msp                                 html  
    names-set                               html  
    names                                   html  
    peaks                                   html  
    plotCircos                              html  
    printInformationSelect                  html  
    sd01_outputXCMS                         html  
    sd02_deconvoluted                       html  
    shinyCircos                             html  
    show-method                             html  
    similarityMat                           html  
    thresholdLinkMatrix                     html  
    tissue                                  html  
    truncateName                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MetCirc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MetCirc' as MetCirc_1.13.2.zip
* DONE (MetCirc)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'MetCirc' successfully unpacked and MD5 sums checked