Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 12:25:35 -0400 (Tue, 09 Apr 2019).
Package 658/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
GenVisR 1.15.3 Zachary Skidmore
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | ERROR | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | ERROR | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | ERROR | OK |
Package: GenVisR |
Version: 1.15.3 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GenVisR_1.15.3.tar.gz && rm -rf GenVisR.buildbin-libdir && mkdir GenVisR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenVisR.buildbin-libdir GenVisR_1.15.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GenVisR_1.15.3.zip && rm GenVisR_1.15.3.tar.gz GenVisR_1.15.3.zip |
StartedAt: 2019-04-08 20:13:01 -0400 (Mon, 08 Apr 2019) |
EndedAt: 2019-04-08 20:14:29 -0400 (Mon, 08 Apr 2019) |
EllapsedTime: 87.8 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GenVisR_1.15.3.tar.gz && rm -rf GenVisR.buildbin-libdir && mkdir GenVisR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenVisR.buildbin-libdir GenVisR_1.15.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GenVisR_1.15.3.zip && rm GenVisR_1.15.3.tar.gz GenVisR_1.15.3.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 2099k 100 2099k 0 0 26.9M 0 --:--:-- --:--:-- --:--:-- 29.2M install for i386 * installing *source* package 'GenVisR' ... ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GenVisR' finding HTML links ... done Clinical-class html GMS-class html GMS_Virtual-class html GMS_v4-class html GenVisR html HCC1395_Germline html HCC1395_N html HCC1395_T html Lolliplot-class html LucCNseg html MutSpectra-class html MutationAnnotationFormat-class html MutationAnnotationFormat_Virtual-class html MutationAnnotationFormat_v1.0-class html MutationAnnotationFormat_v2.0-class html MutationAnnotationFormat_v2.1-class html MutationAnnotationFormat_v2.2-class html MutationAnnotationFormat_v2.3-class html MutationAnnotationFormat_v2.4-class html PIK3CA html Rainfall-class html SNPloci html TvTi html VEP-class html VEP_Virtual-class html VEP_v88-class html Waterfall-class html brcaMAF html cnFreq html cnSpec html cnView html compIdent html covBars html cytoGeno html drawPlot-methods html genCov html geneViz html getData-methods html getDescription-methods html getGrob-methods html getHeader-methods html getMeta-methods html getMutation-methods html getPath-methods html getPosition-methods html getSample-methods html getVersion-methods html hg19chr html ideoView html lohSpec html lohView html lolliplot html lolliplot_AA2sidechain html lolliplot_buildMain html waterfall html writeData-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GenVisR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GenVisR' as GenVisR_1.15.3.zip * DONE (GenVisR) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'GenVisR' successfully unpacked and MD5 sums checked