Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 12:22:22 -0400 (Tue, 09 Apr 2019).
Package 313/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
CODEX 1.15.1 Yuchao Jiang
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: CODEX |
Version: 1.15.1 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CODEX_1.15.1.tar.gz && rm -rf CODEX.buildbin-libdir && mkdir CODEX.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CODEX.buildbin-libdir CODEX_1.15.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CODEX_1.15.1.zip && rm CODEX_1.15.1.tar.gz CODEX_1.15.1.zip |
StartedAt: 2019-04-08 20:11:07 -0400 (Mon, 08 Apr 2019) |
EndedAt: 2019-04-08 20:12:18 -0400 (Mon, 08 Apr 2019) |
EllapsedTime: 71.5 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CODEX_1.15.1.tar.gz && rm -rf CODEX.buildbin-libdir && mkdir CODEX.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CODEX.buildbin-libdir CODEX_1.15.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CODEX_1.15.1.zip && rm CODEX_1.15.1.tar.gz CODEX_1.15.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 6 732k 6 49152 0 0 800k 0 --:--:-- --:--:-- --:--:-- 888k 100 732k 100 732k 0 0 10.8M 0 --:--:-- --:--:-- --:--:-- 11.9M install for i386 * installing *source* package 'CODEX' ... ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CODEX' finding HTML links ... done CODEX-package html bambedObjDemo html choiceofK html coverageObjDemo html gcDemo html getbambed html getcoverage html getgc html getmapp html mappDemo html mapp_ref html mappability html normObjDemo html normalize html normalize2 html qc html qcObjDemo html segment html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CODEX' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'CODEX' as CODEX_1.15.1.zip * DONE (CODEX) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'CODEX' successfully unpacked and MD5 sums checked