Back to the "Multiple platform build/check report" |
This page was generated on 2015-08-22 17:45:00 -0700 (Sat, 22 Aug 2015).
Package 80/246 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||
facopy.annot 0.103.0 David Mosen-Ansorena
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | ||||||
moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | OK | ||||||
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | [ OK ] | OK |
Package: facopy.annot |
Version: 0.103.0 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings facopy.annot_0.103.0.tar.gz |
StartedAt: 2015-08-22 09:12:43 -0700 (Sat, 22 Aug 2015) |
EndedAt: 2015-08-22 09:13:30 -0700 (Sat, 22 Aug 2015) |
EllapsedTime: 47.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: facopy.annot.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings facopy.annot_0.103.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.2-data-experiment/meat/facopy.annot.Rcheck’ * using R version 3.2.2 Patched (2015-08-14 r69078) * using platform: x86_64-apple-darwin10.8.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘facopy.annot/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘facopy.annot’ version ‘0.103.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘facopy.annot’ can be installed ... [3s/4s] OK * checking installed package size ... NOTE installed size is 6.2Mb sub-directories of 1Mb or more: data 5.9Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [5s/6s] OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.2-data-experiment/meat/facopy.annot.Rcheck/00check.log’ for details.
facopy.annot.Rcheck/00install.out:
* installing *source* package ‘facopy.annot’ ... ** data ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (facopy.annot)
facopy.annot.Rcheck/facopy.annot-Ex.timings:
name | user | system | elapsed | |
hg18_armLimits | 0.029 | 0.005 | 0.033 | |
hg18_db_gsk_bladder | 0.017 | 0.001 | 0.018 | |
hg18_db_gsk_blood | 0.022 | 0.002 | 0.025 | |
hg18_db_gsk_bone | 0.013 | 0.001 | 0.016 | |
hg18_db_gsk_brain | 0.020 | 0.001 | 0.024 | |
hg18_db_gsk_breast | 0.022 | 0.000 | 0.028 | |
hg18_db_gsk_cervix | 0.016 | 0.001 | 0.021 | |
hg18_db_gsk_cns | 0.022 | 0.001 | 0.033 | |
hg18_db_gsk_colon | 0.020 | 0.001 | 0.020 | |
hg18_db_gsk_connective_tissue | 0.015 | 0.001 | 0.016 | |
hg18_db_gsk_esophagus | 0.018 | 0.001 | 0.019 | |
hg18_db_gsk_eye | 0.005 | 0.001 | 0.006 | |
hg18_db_gsk_kidney | 0.017 | 0.001 | 0.021 | |
hg18_db_gsk_liver | 0.021 | 0.001 | 0.024 | |
hg18_db_gsk_lung | 0.031 | 0.001 | 0.062 | |
hg18_db_gsk_muscle | 0.017 | 0.001 | 0.017 | |
hg18_db_gsk_ovary | 0.019 | 0.000 | 0.019 | |
hg18_db_gsk_pancreas | 0.017 | 0.001 | 0.017 | |
hg18_db_gsk_pharynx | 0.013 | 0.001 | 0.013 | |
hg18_db_gsk_placenta | 0.016 | 0.000 | 0.016 | |
hg18_db_gsk_prostate | 0.018 | 0.000 | 0.029 | |
hg18_db_gsk_rectum | 0.014 | 0.001 | 0.016 | |
hg18_db_gsk_sarcoma | 0.011 | 0.001 | 0.011 | |
hg18_db_gsk_stomach | 0.022 | 0.000 | 0.024 | |
hg18_db_gsk_synovium | 0.006 | 0.001 | 0.007 | |
hg18_db_gsk_thyroid | 0.019 | 0.001 | 0.019 | |
hg18_db_gsk_uterus | 0.019 | 0.001 | 0.019 | |
hg18_db_nci60 | 0.025 | 0.001 | 0.025 | |
hg18_db_tcga_blca | 0.028 | 0.001 | 0.031 | |
hg18_db_tcga_brca | 0.028 | 0.001 | 0.042 | |
hg18_db_tcga_cesc | 0.065 | 0.001 | 0.091 | |
hg18_db_tcga_coad | 0.025 | 0.000 | 0.029 | |
hg18_db_tcga_gbm | 0.027 | 0.000 | 0.037 | |
hg18_db_tcga_hnsc | 0.026 | 0.001 | 0.027 | |
hg18_db_tcga_kirc | 0.027 | 0.001 | 0.027 | |
hg18_db_tcga_kirp | 0.025 | 0.001 | 0.025 | |
hg18_db_tcga_lgg | 0.025 | 0.001 | 0.026 | |
hg18_db_tcga_lihc | 0.027 | 0.001 | 0.046 | |
hg18_db_tcga_luad | 0.028 | 0.000 | 0.033 | |
hg18_db_tcga_lusc | 0.028 | 0.000 | 0.041 | |
hg18_db_tcga_ov | 0.027 | 0.000 | 0.028 | |
hg18_db_tcga_prad | 0.027 | 0.000 | 0.032 | |
hg18_db_tcga_read | 0.026 | 0.000 | 0.045 | |
hg18_db_tcga_stad | 0.026 | 0.000 | 0.029 | |
hg18_db_tcga_thca | 0.023 | 0.000 | 0.024 | |
hg18_db_tcga_ucec | 0.025 | 0.001 | 0.027 | |
hg18_feature_cancergene | 0.010 | 0.001 | 0.010 | |
hg18_feature_ensembl | 0.359 | 0.006 | 0.506 | |
hg18_feature_lincRNA | 0.025 | 0.002 | 0.027 | |
hg18_feature_mirnas | 0.012 | 0.001 | 0.023 | |
hg18_feature_oncogene | 0.007 | 0.000 | 0.007 | |
hg18_feature_tumorsupressor | 0.006 | 0.001 | 0.010 | |
hg19_armLimits | 0.003 | 0.000 | 0.004 | |
hg19_db_gsk_bladder | 0.018 | 0.001 | 0.033 | |
hg19_db_gsk_blood | 0.031 | 0.002 | 0.039 | |
hg19_db_gsk_bone | 0.015 | 0.001 | 0.016 | |
hg19_db_gsk_brain | 0.019 | 0.001 | 0.019 | |
hg19_db_gsk_breast | 0.028 | 0.002 | 0.030 | |
hg19_db_gsk_cervix | 0.018 | 0.001 | 0.020 | |
hg19_db_gsk_cns | 0.021 | 0.001 | 0.023 | |
hg19_db_gsk_colon | 0.026 | 0.001 | 0.028 | |
hg19_db_gsk_connective_tissue | 0.017 | 0.000 | 0.017 | |
hg19_db_gsk_esophagus | 0.016 | 0.000 | 0.017 | |
hg19_db_gsk_eye | 0.005 | 0.001 | 0.005 | |
hg19_db_gsk_kidney | 0.016 | 0.001 | 0.017 | |
hg19_db_gsk_liver | 0.024 | 0.001 | 0.026 | |
hg19_db_gsk_lung | 0.025 | 0.001 | 0.027 | |
hg19_db_gsk_muscle | 0.015 | 0.000 | 0.014 | |
hg19_db_gsk_ovary | 0.018 | 0.000 | 0.034 | |
hg19_db_gsk_pancreas | 0.018 | 0.001 | 0.019 | |
hg19_db_gsk_pharynx | 0.015 | 0.001 | 0.017 | |
hg19_db_gsk_placenta | 0.022 | 0.001 | 0.023 | |
hg19_db_gsk_prostate | 0.019 | 0.001 | 0.031 | |
hg19_db_gsk_rectum | 0.014 | 0.001 | 0.014 | |
hg19_db_gsk_sarcoma | 0.011 | 0.001 | 0.011 | |
hg19_db_gsk_stomach | 0.021 | 0.001 | 0.024 | |
hg19_db_gsk_synovium | 0.004 | 0.001 | 0.004 | |
hg19_db_gsk_thyroid | 0.017 | 0.000 | 0.020 | |
hg19_db_gsk_uterus | 0.017 | 0.000 | 0.018 | |
hg19_db_nci60 | 0.037 | 0.001 | 0.047 | |
hg19_db_tcga_blca | 0.031 | 0.001 | 0.033 | |
hg19_db_tcga_brca | 0.027 | 0.001 | 0.027 | |
hg19_db_tcga_cesc | 0.032 | 0.001 | 0.055 | |
hg19_db_tcga_coad | 0.039 | 0.001 | 0.052 | |
hg19_db_tcga_gbm | 0.027 | 0.000 | 0.027 | |
hg19_db_tcga_hnsc | 0.026 | 0.000 | 0.026 | |
hg19_db_tcga_kirc | 0.030 | 0.001 | 0.036 | |
hg19_db_tcga_kirp | 0.027 | 0.001 | 0.042 | |
hg19_db_tcga_lgg | 0.030 | 0.000 | 0.032 | |
hg19_db_tcga_lihc | 0.031 | 0.001 | 0.034 | |
hg19_db_tcga_luad | 0.028 | 0.001 | 0.042 | |
hg19_db_tcga_lusc | 0.032 | 0.001 | 0.036 | |
hg19_db_tcga_ov | 0.026 | 0.000 | 0.038 | |
hg19_db_tcga_prad | 0.029 | 0.000 | 0.032 | |
hg19_db_tcga_read | 0.026 | 0.000 | 0.027 | |
hg19_db_tcga_stad | 0.030 | 0.000 | 0.031 | |
hg19_db_tcga_thca | 0.022 | 0.000 | 0.023 | |
hg19_db_tcga_ucec | 0.030 | 0.000 | 0.034 | |
hg19_feature_cancergene | 0.010 | 0.000 | 0.013 | |
hg19_feature_ensembl | 0.594 | 0.010 | 0.706 | |
hg19_feature_lincRNA | 0.027 | 0.001 | 0.035 | |
hg19_feature_mirnas | 0.023 | 0.001 | 0.024 | |
hg19_feature_oncogene | 0.006 | 0.000 | 0.007 | |
hg19_feature_tumorsupressor | 0.007 | 0.000 | 0.008 | |
mm8_armLimits | 0.003 | 0.000 | 0.006 | |
mm8_feature_ensembl | 0.860 | 0.011 | 1.026 | |
mm8_feature_mirnas | 0.016 | 0.000 | 0.020 | |