Back to Workflows build report for BioC 3.14

This page was generated on 2022-04-11 21:00:10 -0400 (Mon, 11 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4323
riesling1Windows Server 2019 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4108
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4136
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for variants on riesling1


To the developers/maintainers of the variants package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 29/29HostnameOS / ArchINSTALLBUILD
variants 1.18.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2022-04-11 14:45:01 -0400 (Mon, 11 Apr 2022)
git_url: https://git.bioconductor.org/packages/variants
git_branch: RELEASE_3_14
git_last_commit: c3cbdff
git_last_commit_date: 2021-10-26 11:16:16 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK  

Summary

Package: variants
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/workflows/src/contrib/variants_1.18.0.tar.gz && rm -rf variants.buildbin-libdir && mkdir variants.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=variants.buildbin-libdir variants_1.18.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL variants_1.18.0.zip && rm variants_1.18.0.tar.gz variants_1.18.0.zip
StartedAt: 2022-04-11 15:00:43 -0400 (Mon, 11 Apr 2022)
EndedAt: 2022-04-11 15:01:12 -0400 (Mon, 11 Apr 2022)
EllapsedTime: 29.3 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/workflows/src/contrib/variants_1.18.0.tar.gz && rm -rf variants.buildbin-libdir && mkdir variants.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=variants.buildbin-libdir variants_1.18.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL variants_1.18.0.zip && rm variants_1.18.0.tar.gz variants_1.18.0.zip
###
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100 4731k  100 4731k    0     0  6050k      0 --:--:-- --:--:-- --:--:-- 6042k

install for i386

* installing *source* package 'variants' ...
** using staged installation
** inst
** help
No man pages found in package  'variants' 
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'variants' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'variants' as variants_1.18.0.zip
* DONE (variants)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'variants' successfully unpacked and MD5 sums checked