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### Running command:
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###   C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:msqrob2.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings msqrob2_1.2.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.14-bioc/meat/msqrob2.Rcheck'
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'msqrob2/DESCRIPTION' ... OK
* this is package 'msqrob2' version '1.2.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'msqrob2' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
msqrobAggregate 4.45   0.09   38.02
msqrob          4.30   0.05   37.97
msqrobLmer      3.78   0.03   34.67
** running examples for arch 'x64' ... ERROR
Running examples in 'msqrob2-Ex.R' failed
Warning in file(con, "r") :
  cannot open file '../msqrob2-Ex_x64.Rout': Permission denied
Error in file(con, "r") : cannot open the connection
Execution halted

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/msqrob2_1.2.0.tar.gz && rm -rf msqrob2.buildbin-libdir && mkdir msqrob2.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=msqrob2.buildbin-libdir msqrob2_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL msqrob2_1.2.0.zip && rm msqrob2_1.2.0.tar.gz msqrob2_1.2.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  292k  100  292k    0     0   837k      0 --:--:-- --:--:-- --:--:--  839k

install for i386

* installing *source* package 'msqrob2' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'msqrob2'
    finding HTML links ... done
    StatModel                               html  
    data                                    html  
    hypothesisTest                          html  
    makeContrast                            html  
    msqrob                                  html  
    msqrobAggregate                         html  
    msqrobGlm                               html  
    msqrobHurdle                            html  
    msqrobLm                                html  
    msqrobLmer                              html  
    msqrobQB                                html  
    smallestUniqueGroups                    html  
    statModelAccessors                      html  
    statModelMethods                        html  
    topTable                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'msqrob2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'msqrob2' as msqrob2_1.2.0.zip
* DONE (msqrob2)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'msqrob2' successfully unpacked and MD5 sums checked