| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:36 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the geNetClassifier package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/geNetClassifier.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 737/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| geNetClassifier 1.34.0 (landing page) Sara Aibar
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: geNetClassifier |
| Version: 1.34.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/geNetClassifier_1.34.0.tar.gz && rm -rf geNetClassifier.buildbin-libdir && mkdir geNetClassifier.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geNetClassifier.buildbin-libdir geNetClassifier_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL geNetClassifier_1.34.0.zip && rm geNetClassifier_1.34.0.tar.gz geNetClassifier_1.34.0.zip |
| StartedAt: 2022-04-12 04:27:30 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:29:02 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 92.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/geNetClassifier_1.34.0.tar.gz && rm -rf geNetClassifier.buildbin-libdir && mkdir geNetClassifier.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geNetClassifier.buildbin-libdir geNetClassifier_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL geNetClassifier_1.34.0.zip && rm geNetClassifier_1.34.0.tar.gz geNetClassifier_1.34.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
20 2704k 20 549k 0 0 734k 0 0:00:03 --:--:-- 0:00:03 734k
74 2704k 74 2027k 0 0 1151k 0 0:00:02 0:00:01 0:00:01 1151k
100 2704k 100 2704k 0 0 1301k 0 0:00:02 0:00:02 --:--:-- 1302k
install for i386
* installing *source* package 'geNetClassifier' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'geNetClassifier'
finding HTML links ... done
GeNetClassifierReturn-class html
GeneralizationError-class html
GenesNetwork-class html
GenesRanking-class html
calculateGenesRanking html
externalValidation.probMatrix html
externalValidation.stats html
gClasses-methods html
geNetClassifier-package html
geNetClassifier html
finding level-2 HTML links ... done
geneSymbols html
genesDetails-methods html
getEdges-methods html
getNodes-methods html
getNumEdges-methods html
getNumNodes-methods html
getRanking-methods html
getSubNetwork-methods html
getTopRanking-methods html
leukemiasClassifier html
network2txt html
numGenes-methods html
numSignificantGenes-methods html
overview-methods html
plot.GeNetClassifierReturn html
plot.GenesRanking html
plotAssignments html
plotDiscriminantPower html
plotExpressionProfiles html
plotNetwork html
queryGeNetClassifier html
querySummary html
setProperties-methods html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'geNetClassifier' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'geNetClassifier' as geNetClassifier_1.34.0.zip
* DONE (geNetClassifier)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'geNetClassifier' successfully unpacked and MD5 sums checked