############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/easier_1.0.0.tar.gz && rm -rf easier.buildbin-libdir && mkdir easier.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easier.buildbin-libdir easier_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL easier_1.0.0.zip && rm easier_1.0.0.tar.gz easier_1.0.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 86 829k 86 716k 0 0 1272k 0 --:--:-- --:--:-- --:--:-- 1271k 100 829k 100 829k 0 0 883k 0 --:--:-- --:--:-- --:--:-- 883k install for i386 * installing *source* package 'easier' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'easier' finding HTML links ... done assess_immune_response html calc_z_score html categorize_TMB html compute_Ayers_expIS html compute_CC_pairs html compute_CCpair_score html compute_CYT html compute_Davoli_IS html compute_IFNy html compute_IMPRES_MSI html compute_LR_pairs html compute_RIR html compute_Roh_IS html compute_TF_activity html compute_TLS html compute_Tcell_inflamed html compute_cell_fractions html compute_chemokines html compute_pathway_activity html compute_scores_immune_response html easier-pkg html explore_biomarkers html get_OE_bulk html get_semi_random_OE html predict_immune_response html predict_with_rmtlr html reannotate_genes html retrieve_easier_score html rmtlr_test html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'easier' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'easier' as easier_1.0.0.zip * DONE (easier) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'easier' successfully unpacked and MD5 sums checked