Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:10 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for artMS on tokay2


To the developers/maintainers of the artMS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/artMS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 84/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
artMS 1.12.0  (landing page)
David Jimenez-Morales
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/artMS
git_branch: RELEASE_3_14
git_last_commit: 58efc32
git_last_commit_date: 2021-10-26 12:47:58 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: artMS
Version: 1.12.0
Command: rm -rf artMS.buildbin-libdir && mkdir artMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=artMS.buildbin-libdir artMS_1.12.0.tar.gz
StartedAt: 2022-04-13 05:37:15 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 05:38:16 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 61.3 seconds
RetCode: 0
Status:   OK  
PackageFile: artMS_1.12.0.zip
PackageFileSize: 2.932 MiB

Command output

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###
### Running command:
###
###   rm -rf artMS.buildbin-libdir && mkdir artMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=artMS.buildbin-libdir artMS_1.12.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'artMS' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'artMS'
    finding HTML links ... done
    artmsAnalysisQuantifications            html  
    artmsAnnotateSpecie                     html  
    artmsAnnotationUniprot                  html  
    artmsAvgIntensityRT                     html  
    artmsChangeColumnName                   html  
    artmsConvertMetabolomics                html  
    artmsDataPlots                          html  
    artmsEnrichLog2fc                       html  
    artmsEnrichProfiler                     html  
    artmsEvidenceToSAINTq                   html  
    artmsEvidenceToSaintExpress             html  
    artmsFilterEvidenceContaminants         html  
    artmsGeneratePhSiteExtended             html  
    artmsIsEvidenceNewVersion               html  
    artmsIsSpeciesSupported                 html  
    artmsLeaveOnlyUniprotEntryID            html  
    artmsMapUniprot2Entrez                  html  
    artmsMergeEvidenceAndKeys               html  
    artmsMsstatsSummary                     html  
    artmsPhosfateOutput                     html  
    artmsPhotonOutput                       html  
    artmsPlotHeatmapQuant                   html  
    artmsProtein2SiteConversion             html  
    artmsQualityControlEvidenceBasic        html  
    artmsQualityControlEvidenceExtended     html  
    artmsQualityControlMetabolomics         html  
    artmsQualityControlSummaryExtended      html  
    artmsQuantification                     html  
    artmsResultsWide                        html  
    artmsSILACtoLong                        html  
    artmsSpectralCounts                     html  
    artmsVolcanoPlot                        html  
    artmsWriteConfigYamlFile                html  
    artms_config                            html  
    artms_data_corum_mito_database          html  
    artms_data_pathogen_LPN                 html  
    artms_data_pathogen_TB                  html  
    artms_data_ph_config                    html  
    artms_data_ph_contrast                  html  
    artms_data_ph_evidence                  html  
    artms_data_ph_keys                      html  
    artms_data_ph_msstats_modelqc           html  
    artms_data_ph_msstats_results           html  
    artms_data_randomDF                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'artMS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'artMS' as artMS_1.12.0.zip
* DONE (artMS)