Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:26 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the Sushi package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/Sushi.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1908/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Sushi 1.32.0 (landing page) Douglas H Phanstiel
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: Sushi |
Version: 1.32.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Sushi_1.32.0.tar.gz && rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sushi.buildbin-libdir Sushi_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Sushi_1.32.0.zip && rm Sushi_1.32.0.tar.gz Sushi_1.32.0.zip |
StartedAt: 2022-04-12 05:07:51 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 05:09:20 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 88.8 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Sushi_1.32.0.tar.gz && rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sushi.buildbin-libdir Sushi_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Sushi_1.32.0.zip && rm Sushi_1.32.0.tar.gz Sushi_1.32.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 16 4024k 16 681k 0 0 703k 0 0:00:05 --:--:-- 0:00:05 703k 57 4024k 57 2296k 0 0 1166k 0 0:00:03 0:00:01 0:00:02 1166k 100 4024k 100 4024k 0 0 1505k 0 0:00:02 0:00:02 --:--:-- 1505k install for i386 * installing *source* package 'Sushi' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Sushi' finding HTML links ... done SushiColors html Sushi_5C.bedpe html Sushi_ChIAPET_pol2.bedpe html Sushi_ChIPExo_CTCF.bedgraph html Sushi_ChIPSeq_CTCF.bedgraph html Sushi_ChIPSeq_pol2.bed html Sushi_ChIPSeq_pol2.bedgraph html Sushi_ChIPSeq_severalfactors.bed html Sushi_DNaseI.bedgraph html Sushi_GWAS.bed html Sushi_HiC.matrix html Sushi_RNASeq_K562.bedgraph html Sushi_genes.bed html Sushi_hg18_genome html Sushi_transcripts.bed html addlegend html chromOffsets html convertstrandinfo html labelgenome html labelplot html maptocolors html maptolwd html opaque html plotBed html plotBedgraph html plotBedpe html plotGenes html finding level-2 HTML links ... done plotHic html plotManhattan html sortChrom html zoombox html zoomsregion html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Sushi' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Sushi' as Sushi_1.32.0.zip * DONE (Sushi) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'Sushi' successfully unpacked and MD5 sums checked