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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SeqVarTools_1.32.0.tar.gz && rm -rf SeqVarTools.buildbin-libdir && mkdir SeqVarTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SeqVarTools.buildbin-libdir SeqVarTools_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SeqVarTools_1.32.0.zip && rm SeqVarTools_1.32.0.tar.gz SeqVarTools_1.32.0.zip
###
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100  529k  100  529k    0     0   726k      0 --:--:-- --:--:-- --:--:--  725k

install for i386

* installing *source* package 'SeqVarTools' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SeqVarTools'
    finding HTML links ... done
    Iterator-class                          html  
    finding level-2 HTML links ... done

    SeqVarData-class                        html  
    SeqVarTools-package                     html  
    allele-methods                          html  
    alleleFrequency                         html  
    alternateAlleleDetection                html  
    applyMethod                             html  
    chromWithPAR                            html  
    countSingletons                         html  
    duplicateDiscordance                    html  
    getGenotype                             html  
    getVariableLengthData                   html  
    heterozygosity                          html  
    hwe                                     html  
    imputedDosage                           html  
    inbreedCoeff                            html  
    isSNV                                   html  
    isVariant                               html  
    meanBySample                            html  
    mendelErr                               html  
    missingGenotypeRate                     html  
    pca                                     html  
    pedigree                                html  
    refFrac                                 html  
    regression                              html  
    setVariantID                            html  
    titv                                    html  
    variantInfo                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SeqVarTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SeqVarTools' as SeqVarTools_1.32.0.zip
* DONE (SeqVarTools)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SeqVarTools' successfully unpacked and MD5 sums checked