Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2022-04-13 12:07:10 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for RadioGx on tokay2


To the developers/maintainers of the RadioGx package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/RadioGx.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1519/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RadioGx 1.4.0  (landing page)
Benjamin Haibe-Kains
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/RadioGx
git_branch: RELEASE_3_14
git_last_commit: b51a819
git_last_commit_date: 2021-10-26 13:00:29 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RadioGx
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RadioGx_1.4.0.tar.gz && rm -rf RadioGx.buildbin-libdir && mkdir RadioGx.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RadioGx.buildbin-libdir RadioGx_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RadioGx_1.4.0.zip && rm RadioGx_1.4.0.tar.gz RadioGx_1.4.0.zip
StartedAt: 2022-04-12 06:19:51 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:21:24 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 93.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RadioGx_1.4.0.tar.gz && rm -rf RadioGx.buildbin-libdir && mkdir RadioGx.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RadioGx.buildbin-libdir RadioGx_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RadioGx_1.4.0.zip && rm RadioGx_1.4.0.tar.gz RadioGx_1.4.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  7 2234k    7  156k    0     0   513k      0  0:00:04 --:--:--  0:00:04  513k
 63 2234k   63 1420k    0     0  1091k      0  0:00:02  0:00:01  0:00:01 1091k
100 2234k  100 2234k    0     0  1308k      0  0:00:01  0:00:01 --:--:-- 1308k

install for i386

* installing *source* package 'RadioGx' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RadioGx'
    finding HTML links ... done
    RadioSet-class                          html  
    RadioSet                                html  
    RadioSig                                html  
    availableRSets                          html  
    checkRSetStructure                      html  
    clevelandSmall                          html  
    computeAUC                              html  
    computeD10                              html  
    computeSF2                              html  
    dim-RadioSet-method                     html  
    doseResponseCurve                       html  
    downloadRSet                            html  
    linearQuadraticModel                    html  
    mDataNames-RadioSet-method              html  
    plotCurve                               html  
    radSensitivitySig                       html  
    radiationInfo-set                       html  
    radiationInfo                           html  
    radiationTypes-set                      html  
    radiationTypes                          html  
    show-RadioSet-method                    html  
    show-RadioSig-method                    html  
    showSigAnnot-RadioSig-method            html  
    sub-RadioSet-ANY-ANY-ANY-method         html  
    subsetTo-RadioSet-method                html  
    summarizeMolecularProfiles-RadioSet-method
                                            html  
    summarizeSensitivityProfiles-RadioSet-method
                                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RadioGx' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RadioGx' as RadioGx_1.4.0.zip
* DONE (RadioGx)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'RadioGx' successfully unpacked and MD5 sums checked