Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:14 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for RNAinteract on tokay2


To the developers/maintainers of the RNAinteract package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/RNAinteract.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1629/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RNAinteract 1.42.0  (landing page)
Mike Smith
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/RNAinteract
git_branch: RELEASE_3_14
git_last_commit: 5d8fc4b
git_last_commit_date: 2021-10-26 11:58:13 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RNAinteract
Version: 1.42.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RNAinteract_1.42.0.tar.gz && rm -rf RNAinteract.buildbin-libdir && mkdir RNAinteract.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RNAinteract.buildbin-libdir RNAinteract_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RNAinteract_1.42.0.zip && rm RNAinteract_1.42.0.tar.gz RNAinteract_1.42.0.zip
StartedAt: 2022-04-12 06:01:29 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:02:44 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 75.0 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RNAinteract_1.42.0.tar.gz && rm -rf RNAinteract.buildbin-libdir && mkdir RNAinteract.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RNAinteract.buildbin-libdir RNAinteract_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RNAinteract_1.42.0.zip && rm RNAinteract_1.42.0.tar.gz RNAinteract_1.42.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  165k  100  165k    0     0   284k      0 --:--:-- --:--:-- --:--:--  284k

install for i386

* installing *source* package 'RNAinteract' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RNAinteract'
    finding HTML links ... done
    RNAinteract-class                       html  
    RNAinteract-package                     html  
    bindsamples                             html  
    computePI                               html  
    computePValues                          html  
    finding level-2 HTML links ... done

    createCellHTSFromFiles                  html  
    createRNAinteract                       html  
    createRNAinteractFromFiles              html  
    embedPCA                                html  
    estimateMainEffect                      html  
    getData                                 html  
    getMain                                 html  
    getReplicateData                        html  
    getSampleNames                          html  
    getScale                                html  
    grid.doublePerturbation                 html  
    grid.sgiHeatmap                         html  
    normalizeMainEffectQuery                html  
    normalizeMainEffectTemplate             html  
    normalizePlateEffect                    html  
    plotDoublePerturbation                  html  
    plotHeatmap                             html  
    reportAnnotation                        html  
    sgi                                     html  
    sgisubset                               html  
    sgisubsetQueryDesign                    html  
    startReport                             html  
    summarizeSamples                        html  
    swaptree                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RNAinteract' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RNAinteract' as RNAinteract_1.42.0.zip
* DONE (RNAinteract)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'RNAinteract' successfully unpacked and MD5 sums checked