Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:46 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the KEGGgraph package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/KEGGgraph.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 979/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
KEGGgraph 1.54.0 (landing page) Jitao David Zhang
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: KEGGgraph |
Version: 1.54.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KEGGgraph_1.54.0.tar.gz && rm -rf KEGGgraph.buildbin-libdir && mkdir KEGGgraph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KEGGgraph.buildbin-libdir KEGGgraph_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KEGGgraph_1.54.0.zip && rm KEGGgraph_1.54.0.tar.gz KEGGgraph_1.54.0.zip |
StartedAt: 2022-04-12 04:36:23 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 04:38:31 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 127.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KEGGgraph_1.54.0.tar.gz && rm -rf KEGGgraph.buildbin-libdir && mkdir KEGGgraph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KEGGgraph.buildbin-libdir KEGGgraph_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KEGGgraph_1.54.0.zip && rm KEGGgraph_1.54.0.tar.gz KEGGgraph_1.54.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 63 929k 63 590k 0 0 632k 0 0:00:01 --:--:-- 0:00:01 632k 100 929k 100 929k 0 0 756k 0 0:00:01 0:00:01 --:--:-- 757k install for i386 * installing *source* package 'KEGGgraph' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'KEGGgraph' finding HTML links ... done KEGGEdge-class html KEGGEdgeSubType-class html KEGGEdgeSubtype html KEGGEdgeType html KEGGGraphics-class html KEGGGroup-class html KEGGNode-class html KEGGNodeType html KEGGPATHID2NAME html KEGGPathway-class html KEGGPathwayInfo-class html KEGGReaction-class html KEGGpathway2Graph html KEGGpathway2reactionGraph html expandKEGGNode html expandKEGGPathway html getDisplayName-methods html getEntryID-methods html getKEGGID-methods html getKEGGgeneLink-methods html getKEGGnodeData html getKGMLurl html getName-methods html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/KEGGgraph.buildbin-libdir/00LOCK-KEGGgraph/00new/KEGGgraph/help/getName+2CKEGGEdgeSubtype-method.html getNamedElement html getPathwayInfo-methods html getReactions-methods html getRgraphvizEdgeNames html getSubtype-methods html getTitle-methods html getType-methods html getValue-methods html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/KEGGgraph.buildbin-libdir/00LOCK-KEGGgraph/00new/KEGGgraph/help/getValue+2CKEGGEdgeSubtype-method.html graphDensity html isHomoList html kgmlFileName2PathwayName html mergeGraphs html mergeKEGGgraphs html neighborhood html parseEntry html parseGraphics html parseKGML html parseKGML2DataFrame html parseKGML2Graph html parseKGMLexpandMaps html parsePathwayInfo html parseReaction html parseRelation html parseSubType html plotKEGGgraph html pvalue2asterisk html queryKEGGsubgraph html randomSubGraph html splitKEGGgroup html subGraphByNodeType html subKEGGgraph html subtypeDisplay-methods html top html translateKEGGID2GeneID html translateKEGGgraph html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'KEGGgraph' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'KEGGgraph' as KEGGgraph_1.54.0.zip * DONE (KEGGgraph) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'KEGGgraph' successfully unpacked and MD5 sums checked