############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/IntramiRExploreR_1.16.0.tar.gz && rm -rf IntramiRExploreR.buildbin-libdir && mkdir IntramiRExploreR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IntramiRExploreR.buildbin-libdir IntramiRExploreR_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL IntramiRExploreR_1.16.0.zip && rm IntramiRExploreR_1.16.0.tar.gz IntramiRExploreR_1.16.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 8 9102k 8 735k 0 0 821k 0 0:00:11 --:--:-- 0:00:11 820k 27 9102k 27 2486k 0 0 1311k 0 0:00:06 0:00:01 0:00:05 1311k 56 9102k 56 5152k 0 0 1777k 0 0:00:05 0:00:02 0:00:03 1777k 96 9102k 96 8743k 0 0 2232k 0 0:00:04 0:00:03 0:00:01 2232k 100 9102k 100 9102k 0 0 2279k 0 0:00:03 0:00:03 --:--:-- 2279k install for i386 * installing *source* package 'IntramiRExploreR' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Note: possible error in 'FGNet_report(feaResults_topGO, ': unused argument (plotKeggPw = FALSE) ** help *** installing help indices converting help for package 'IntramiRExploreR' finding HTML links ... done Affy1_Distance_Final html Affy1_Pearson_Final html Affy2_Distance_Final html Affy2_Pearson_Final html Gene_Visualisation html GetGOS_ALL html IntramiRExploreR html Visualisation html extract_HostGene html extract_intragenic_miR html genes_Stat html miRNA_ID_to_Function html miRNA_summary_DB html miRTargets_Stat html ** building package indices ** installing vignettes 'IntramiRExploreR_vignettes.Rmd' using 'UTF-8' ** testing if installed package can be loaded from temporary location Warning: Package 'IntramiRExploreR' is deprecated and will be removed from Bioconductor version 3.14 ** testing if installed package can be loaded from final location Warning: Package 'IntramiRExploreR' is deprecated and will be removed from Bioconductor version 3.14 ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'IntramiRExploreR' ... ** testing if installed package can be loaded Warning: Package 'IntramiRExploreR' is deprecated and will be removed from Bioconductor version 3.14 * MD5 sums packaged installation of 'IntramiRExploreR' as IntramiRExploreR_1.16.0.zip * DONE (IntramiRExploreR) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'IntramiRExploreR' successfully unpacked and MD5 sums checked