##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GenomicSuperSignature_1.2.1.tar.gz && rm -rf GenomicSuperSignature.buildbin-libdir && mkdir GenomicSuperSignature.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicSuperSignature.buildbin-libdir GenomicSuperSignature_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GenomicSuperSignature_1.2.1.zip && rm GenomicSuperSignature_1.2.1.tar.gz GenomicSuperSignature_1.2.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 14 3750k   14  556k    0     0   886k      0  0:00:04 --:--:--  0:00:04  887k
 45 3750k   45 1711k    0     0  1050k      0  0:00:03  0:00:01  0:00:02 1049k
 77 3750k   77 2925k    0     0  1106k      0  0:00:03  0:00:02  0:00:01 1106k
100 3750k  100 3750k    0     0  1218k      0  0:00:03  0:00:03 --:--:-- 1219k

install for i386

* installing *source* package 'GenomicSuperSignature' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GenomicSuperSignature'
    finding HTML links ... done
    GenomicSignatures-class                 html  
    GenomicSignatures-methods               html  
    PCAGenomicSignatures-class              html  
    PCAGenomicSignatures-methods            html  
    PCAGenomicSignatures                    html  
    PCinRAV                                 html  
    annotatePC                              html  
    annotateRAV                             html  
    buildAvgLoading                         html  
    calculateScore                          html  
    dot-RAVName                             html  
    dot-calculateSilhouetteWidth            html  
    dot-loadingCor                          html  
    drawWordcloud                           html  
    droplist                                html  
    extractPC                               html  
    findKeywordInRAV                        html  
    findSignature                           html  
    findStudiesInCluster                    html  
    getModel                                html  
    heatmapTable                            html  
    makeGeneList                            html  
    meshTable                               html  
    miniAllZ                                html  
    miniRAVmodel                            html  
    miniTCGA                                html  
    msigdb_gsea                             html  
    plotAnnotatedPCA                        html  
    plotValidate                            html  
    res_hcut                                html  
    rmNaInf                                 html  
    rowNorm                                 html  
    run_gsea                                html  
    sampleScoreHeatmap                      html  
    subsetEnrichedPathways                  html  
    subsetGSEA                              html  
    validate                                html  
    validatedSignatures                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GenomicSuperSignature' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenomicSuperSignature' as GenomicSuperSignature_1.2.1.zip
* DONE (GenomicSuperSignature)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'GenomicSuperSignature' successfully unpacked and MD5 sums checked