############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GEOmetadb_1.56.0.tar.gz && rm -rf GEOmetadb.buildbin-libdir && mkdir GEOmetadb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEOmetadb.buildbin-libdir GEOmetadb_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GEOmetadb_1.56.0.zip && rm GEOmetadb_1.56.0.tar.gz GEOmetadb_1.56.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 115k 100 115k 0 0 245k 0 --:--:-- --:--:-- --:--:-- 246k install for i386 Warning in untar2(tarfile, files, list, exdir, restore_times) : failed to copy 'GEOmetadb/vignettes/GEOmetadb.Rmd' to 'GEOmetadb/README.md' * installing *source* package 'GEOmetadb' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GEOmetadb' finding HTML links ... done GEOmetadb-package html columnDescriptions html geoConvert html getBiocPlatformMap html getSQLiteFile html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 Warning in untar2(tarfile, files, list, exdir, restore_times) : failed to copy 'GEOmetadb/vignettes/GEOmetadb.Rmd' to 'GEOmetadb/README.md' * installing *source* package 'GEOmetadb' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GEOmetadb' as GEOmetadb_1.56.0.zip * DONE (GEOmetadb) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'GEOmetadb' successfully unpacked and MD5 sums checked